RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ALKBH6Q3KRA9 238 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 SPATA46Q5T0L3 261 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 PAMR1Q6UXH9 720 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 LRRN1Q6UXK5 716 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 PLEKHG7Q6ZR37 379 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 PRSS45Q7RTY3 260 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 DHRSXQ8N5I4 330 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 ZNF611Q8N823 705 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 NUP37Q8NFH4 326 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 GJC3Q8NFK1 279 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 OR51G2Q8NGK0 314 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 RNF133Q8WVZ7 376 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 TRUB1Q8WWH5 349 aaKnown RBP9.37□□□□□ -0.91
TPM1-217ENST00000559108 RNF166Q96A37 237 aaPredicted RBP9.37□□□□□ -0.91
TPM1-217ENST00000559108 LGALS12Q96DT0 336 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 CNN2Q99439 309 aaKnown RBP9.37□□□□□ -0.91
TPM1-217ENST00000559108 TBX5Q99593 518 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 ZNF649Q9BS31 505 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 PRRG3Q9BZD7 231 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 MRPL37Q9BZE1 423 aaKnown RBP9.37□□□□□ -0.91
TPM1-217ENST00000559108 HDHD2Q9H0R4 259 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 KCNN2Q9H2S1 579 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 CDH20Q9HBT6 801 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 SLCO1C1Q9NYB5 712 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 HAO2Q9NYQ3 351 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 ZNF319Q9P2F9 582 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 MYRFQ9Y2G1 1151 aa9.37□□□□□ -0.91
TPM1-217ENST00000559108 SLC22A31A6NKX4 558 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 H0YAE9 185 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 NDUFS7O75251 213 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 ABHD16AO95870 558 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 CLPTM1O96005 669 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 OR4A8P0C604 315 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 SLC2A1P11166 492 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 DBTP11182 482 aaKnown RBP9.36□□□□□ -0.91
TPM1-217ENST00000559108 APLNRP35414 380 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 BLVRAP53004 296 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 IL5RAQ01344 420 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 MVKQ03426 396 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 ZNF85Q03923 595 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 PLP2Q04941 152 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 HNRNPA0Q13151 305 aaKnown RBP9.36□□□□□ -0.91
TPM1-217ENST00000559108 TBC1D28Q2M2D7 210 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 ZNF684Q5T5D7 378 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 COLCA1Q6ZS62 124 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 GID4Q8IVV7 300 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 SLC35F2Q8IXU6 374 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 DEPDC4Q8N2C3 294 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 ZNF555Q8NEP9 628 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 OR2AJ1Q8NGZ0 328 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 SLC25A40Q8TBP6 338 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 SGCDQ92629 289 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 FBXW5Q969U6 566 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 RNFT2Q96EX2 444 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 MARS2Q96GW9 593 aaKnown RBP9.36□□□□□ -0.91
TPM1-217ENST00000559108 ATF6BQ99941 703 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 DHRS9Q9BPW9 319 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 WACQ9BTA9 647 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 TRAF4Q9BUZ4 470 aaPredicted RBP9.36□□□□□ -0.91
TPM1-217ENST00000559108 CDADC1Q9BWV3 514 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 TEX12Q9BXU0 123 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 YIPF3Q9GZM5 350 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 C1orf198Q9H425 327 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 CENPMQ9NSP4 180 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 WARS2Q9UGM6 360 aaKnown RBP9.36□□□□□ -0.91
TPM1-217ENST00000559108 POU2F3Q9UKI9 436 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 STARD10Q9Y365 291 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 USF3Q68DE3 2245 aa9.36□□□□□ -0.91
TPM1-217ENST00000559108 A0A1W2PQL4 384 aaPredicted RBP9.35□□□□□ -0.91
TPM1-217ENST00000559108 F5H5K5 113 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 H0YJX3 145 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 LILRA1O75019 489 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 SRSF10O75494 262 aaKnown RBP9.35□□□□□ -0.91
TPM1-217ENST00000559108 PNPP00491 289 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 PAX7P23759 505 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 TTKP33981 857 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 GLRXP35754 106 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 RBMXP38159 391 aaKnown RBP9.35□□□□□ -0.91
TPM1-217ENST00000559108 SLC15A1P46059 708 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 PRRC2AP48634 2157 aaKnown RBP9.35□□□□□ -0.91
TPM1-217ENST00000559108 PRKXP51817 358 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 UCP2P55851 309 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 GALK2Q01415 458 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 MFGE8Q08431 387 aaPredicted RBP9.35□□□□□ -0.91
TPM1-217ENST00000559108 CDK5R2Q13319 367 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 HLXQ14774 488 aaPredicted RBP9.35□□□□□ -0.91
TPM1-217ENST00000559108 SWI5Q1ZZU3 235 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 LCN1P1Q5VSP4 162 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 TTC23Q5W5X9 447 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 DTX2Q86UW9 622 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 KRTAP1-3Q8IUG1 177 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 ALDH16A1Q8IZ83 802 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 ABHD4Q8TB40 342 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 THEM6Q8WUY1 208 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 PPP1R14AQ96A00 147 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 C4orf45Q96LM5 186 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 OR8B4Q96RC9 309 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 SYT3Q9BQG1 590 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 SOX7Q9BT81 388 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 OR2J1Q9GZK6 312 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms