RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 RFPL4BQ6ZWI9 263 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 RRM2BQ7LG56 351 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 DPPA2Q7Z7J5 298 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 OAFQ86UD1 273 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 OR51F2Q8NH61 342 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 ZNF519Q8TB69 540 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 SLC25A40Q8TBP6 338 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 IPCEF1Q8WWN9 437 aaPredicted RBP6.23□□□□□ -1.41
SPG11-213ENST00000558988 CCL17Q92583 94 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 FAM162AQ96A26 154 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 TMEM186Q96B77 213 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 RBP7Q96R05 134 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 GAL3ST1Q99999 423 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 ZNF416Q9BWM5 594 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 BCL2L14Q9BZR8 327 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 OR2J1Q9GZK6 312 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 FAM107BQ9H098 131 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 TXNIPQ9H3M7 391 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 C1orf198Q9H425 327 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 SAP30LQ9HAJ7 183 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 SIAEQ9HAT2 523 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 EMC7Q9NPA0 242 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 CMTM6Q9NX76 183 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 SLCO1C1Q9NYB5 712 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 UBAP1Q9NZ09 502 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 STX18Q9P2W9 335 aaKnown RBP6.23□□□□□ -1.41
SPG11-213ENST00000558988 A4GNTQ9UNA3 340 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 ADAM18Q9Y3Q7 739 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 GRIP1Q9Y3R0 1128 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 UGT2A1Q9Y4X1 527 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 V9GYQ6 96 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 LOC100509620A0A075B734 347 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 LOC105371242A0A075B767 164 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 ZSCAN5BA6NJL1 495 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 CLDN25C9JDP6 229 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 TIMM8AO60220 97 aaPredicted RBP6.22□□□□□ -1.41
SPG11-213ENST00000558988 MGRN1O60291 552 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 DOK2O60496 412 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 RP2O75695 350 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 MPZL1O95297 269 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 SERPINA1P01009 418 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 NGFP01138 241 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 NPPAP01160 153 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 IGHV1-46P01743 117 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 AMY2AP04746 511 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 MMP7P09237 267 aaPredicted RBP6.22□□□□□ -1.41
SPG11-213ENST00000558988 GAAP10253 952 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 NR2C1P13056 603 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 ZNF250P15622 560 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 ADRA2CP18825 462 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 AMY2BP19961 511 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 PCMT1P22061 227 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 WNT5AP41221 380 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 NUDT2P50583 147 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 TMEM33P57088 247 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 PPP1CBP62140 327 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 SELENOWP63302 87 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 PSG4Q00888 419 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 HIST3H3Q16695 136 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 HFEQ30201 348 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 PCGF3Q3KNV8 242 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 ZNF718Q3SXZ3 478 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 IFI44LQ53G44 452 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 COQ5Q5HYK3 327 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 C10orf128Q5T292 105 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 SLC25A47Q6Q0C1 308 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.22□□□□□ -1.41
SPG11-213ENST00000558988 Q8N9P0 234 aaPredicted RBP6.22□□□□□ -1.41
SPG11-213ENST00000558988 GEMIN6Q8WXD5 167 aaKnown RBP6.22□□□□□ -1.41
SPG11-213ENST00000558988 NABP1Q96AH0 204 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 RASD2Q96D21 266 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 TIMD4Q96H15 378 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 POM121L2Q96KW2 1035 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 DCLRE1CQ96SD1 692 aaKnown RBP6.22□□□□□ -1.41
SPG11-213ENST00000558988 OR2H1Q9GZK4 316 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 POLR2J2Q9GZM3 115 aaKnown RBP6.22□□□□□ -1.41
SPG11-213ENST00000558988 POLR2J3Q9H1A7 115 aaKnown RBP6.22□□□□□ -1.41
SPG11-213ENST00000558988 WNT5BQ9H1J7 359 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 ZNF665Q9H7R5 613 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 GRHPRQ9UBQ7 328 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 IL20RAQ9UHF4 553 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 POLR1DQ9Y2S0 133 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 WIPI2Q9Y4P8 454 aa6.22□□□□□ -1.41
SPG11-213ENST00000558988 IGLV3-9A0A075B6K5 115 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 A0A087WUU8 490 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 TEX13CA0A0J9YWL9 993 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 IGHV3-64DA0A0J9YX35 117 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 GMNCA6NCL1 334 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 A6NIZ1 184 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 CENPBD1B2RD01 187 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 NME4O00746 187 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 SOCS2O14508 198 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 XKRYO14609 159 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 CDC42EP2O14613 210 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 FFAR1O14842 300 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 PLPP2O43688 288 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 DIRAS1O95057 198 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 SNAP29O95721 258 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 TFP02787 698 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 THRBP10828 461 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms