RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 C12orf54Q6X4T0 127 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 CYP4Z1Q86W10 505 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 SLC26A10Q8NG04 563 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 OR10S1Q8NGN2 331 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 FANK1Q8TC84 345 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 ZNF418Q8TF45 676 aaPredicted RBP11.38□□□□□ -0.59
VPS18-203ENST00000558855 SAMD8Q96LT4 415 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 ZNF48Q96MX3 618 aaPredicted RBP11.38□□□□□ -0.59
VPS18-203ENST00000558855 ERMAPQ96PL5 475 aaPredicted RBP11.38□□□□□ -0.59
VPS18-203ENST00000558855 NMNAT3Q96T66 252 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 FAM107BQ9H098 131 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 OR52D1Q9H346 318 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 PATZ1Q9HBE1 687 aaKnown RBP11.38□□□□□ -0.59
VPS18-203ENST00000558855 GCM1Q9NP62 436 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 PNRC2Q9NPJ4 139 aaKnown RBP11.38□□□□□ -0.59
VPS18-203ENST00000558855 ADA2Q9NZK5 511 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 CGGBP1Q9UFW8 167 aaPredicted RBP11.38□□□□□ -0.59
VPS18-203ENST00000558855 RPS6KA6Q9UK32 745 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 B9D1Q9UPM9 204 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 TRRAPQ9Y4A5 3859 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 TMEM89A2RUT3 159 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 F5H5P2 479 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 TMEM178BH3BS89 294 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 J3QLI3 93 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 CYB5R3P00387 301 aaPredicted RBP11.37□□□□□ -0.59
VPS18-203ENST00000558855 ANPEPP15144 967 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 ZNF12P17014 697 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 LIPAP38571 399 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 RPS27P42677 84 aaKnown RBP11.37□□□□□ -0.59
VPS18-203ENST00000558855 GUCA1AP43080 201 aaPredicted RBP11.37□□□□□ -0.59
VPS18-203ENST00000558855 SLC6A9P48067 706 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 GYS2P54840 703 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 BTG1P62324 171 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 ACTG1P63261 375 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 SPIBQ01892 262 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 PAX2Q02962 417 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 LEG1Q6P5S2 330 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 SMARCD3Q6STE5 483 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 FBXW12Q6X9E4 464 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 DPY19L2P2Q6ZN68 376 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 USP43Q70EL4 1123 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 RRM2BQ7LG56 351 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 ADCK1Q86TW2 530 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 JAZF1Q86VZ6 243 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 LRRC28Q86X40 367 aaPredicted RBP11.37□□□□□ -0.59
VPS18-203ENST00000558855 C1orf174Q8IYL3 243 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 BHLHE23Q8NDY6 225 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 OR4K13Q8NH42 304 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 FAM216AQ8WUB2 273 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 ZFAND2BQ8WV99 257 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 MEGF10Q96KG7 1140 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 DUX5Q96PT3 197 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 DIRC2Q96SL1 478 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 SRA1Q9HD15 236 aaKnown RBP11.37□□□□□ -0.59
VPS18-203ENST00000558855 SPAG4Q9NPE6 437 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 ARL8BQ9NVJ2 186 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 MRPL22Q9NWU5 206 aaKnown RBP11.37□□□□□ -0.59
VPS18-203ENST00000558855 ZNF69Q9UC07 566 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 CD300AQ9UGN4 299 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 PPP1R3CQ9UQK1 317 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 PPIAL4AQ9Y536 164 aa11.37□□□□□ -0.59
VPS18-203ENST00000558855 OR6C68A6NDL8 312 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 CEACAM18A8MTB9 384 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 ARPC2O15144 300 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 SNX3O60493 162 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 HLA-DPB1P04440 258 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 RAC2P15153 192 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 GSSP48637 474 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 CENPAP49450 140 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 COMPP49747 757 aaPredicted RBP11.36□□□□□ -0.59
VPS18-203ENST00000558855 UBA52P62987 128 aaKnown RBP11.36□□□□□ -0.59
VPS18-203ENST00000558855 COX10Q12887 443 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 TMEM155Q4W5P6 130 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 ZMAT1Q5H9K5 638 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 SLC18B1Q6NT16 456 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 ARL9Q6T311 187 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 UNQ6126/PRO20091Q6UXV3 157 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 COLCA1Q6ZS62 124 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 SIGLECL1Q8N7X8 197 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 C19orf18Q8NEA5 215 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 SDR9C7Q8NEX9 313 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 OR8D4Q8NGM9 314 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 PTP4A1Q93096 173 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 DACT3Q96B18 629 aaPredicted RBP11.36□□□□□ -0.59
VPS18-203ENST00000558855 WACQ9BTA9 647 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 EGLN3Q9H6Z9 239 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 GORASP2Q9H8Y8 452 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 RPRD1BQ9NQG5 326 aaKnown RBP11.36□□□□□ -0.59
VPS18-203ENST00000558855 IL19Q9UHD0 177 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 AURKCQ9UQB9 309 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 POLR1DQ9Y2S0 133 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 POLR3KQ9Y2Y1 108 aaPredicted RBP11.36□□□□□ -0.59
VPS18-203ENST00000558855 INSIG2Q9Y5U4 225 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 PKD1L1Q8TDX9 2849 aa11.36□□□□□ -0.59
VPS18-203ENST00000558855 IGHV3OR16-10A0A075B7F0 116 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 A0A1B0GWJ7 208 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 A8MXK9 166 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 GADD45GO95257 159 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 ACSM4P0C7M7 580 aa11.35□□□□□ -0.59
VPS18-203ENST00000558855 EGR1P18146 543 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms