RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 RAC2P15153 192 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 GATA3P23771 443 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 HLXQ14774 488 aaPredicted RBP9.7□□□□□ -0.86
CASC4-205ENST00000558735 MEP1BQ16820 701 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 SMARCD3Q6STE5 483 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 ST7LQ8TDW4 575 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 ITLN1Q8WWA0 313 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 PYURFQ96I23 114 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 SIGLEC11Q96RL6 698 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 JMJD8Q96S16 334 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 ZNF747Q9BV97 191 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 GORASP2Q9H8Y8 452 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 PATZ1Q9HBE1 687 aaKnown RBP9.7□□□□□ -0.86
CASC4-205ENST00000558735 SRA1Q9HD15 236 aaKnown RBP9.7□□□□□ -0.86
CASC4-205ENST00000558735 MED4Q9NPJ6 270 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 B9D1Q9UPM9 204 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 AURKCQ9UQB9 309 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 LHFPL6Q9Y693 200 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 PRKDCP78527 4128 aaKnown RBP9.69□□□□□ -0.86
CASC4-205ENST00000558735 IGLV1-36A0A0B4J1U3 117 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 A0A0G2JK05 382 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 TMPRSS2O15393 492 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 FOXH1O75593 365 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 PPP1R3DO95685 299 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 SEMG1P04279 462 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 TNFRSF1AP19438 455 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 TNFSF4P23510 183 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 PRDX6P30041 224 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 MSX2P35548 267 aaPredicted RBP9.69□□□□□ -0.86
CASC4-205ENST00000558735 SLC6A9P48067 706 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 RPS6KA3P51812 740 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 SEC61A1P61619 476 aaKnown RBP9.69□□□□□ -0.86
CASC4-205ENST00000558735 ZMYND11Q15326 602 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 TUSC1Q2TAM9 212 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 RFX4Q33E94 735 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 AWAT1Q58HT5 328 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 OR2T2Q6IF00 324 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 CORO6Q6QEF8 472 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 FBXW12Q6X9E4 464 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 ADCK1Q86TW2 530 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 OR5AS1Q8N127 324 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 OR6V1Q8N148 313 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 DEFB108BQ8NET1 73 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 GJC3Q8NFK1 279 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 DVL3Q92997 716 aaPredicted RBP9.69□□□□□ -0.86
CASC4-205ENST00000558735 COG8Q96MW5 612 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 ERMAPQ96PL5 475 aaPredicted RBP9.69□□□□□ -0.86
CASC4-205ENST00000558735 OR2V2Q96R30 315 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 NDEL1Q9GZM8 345 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 GCM1Q9NP62 436 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 SPAG4Q9NPE6 437 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 ESM1Q9NQ30 184 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 ADA2Q9NZK5 511 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 CD300AQ9UGN4 299 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 SAMD4AQ9UPU9 718 aaKnown RBP9.69□□□□□ -0.86
CASC4-205ENST00000558735 PPP1R3CQ9UQK1 317 aa9.69□□□□□ -0.86
CASC4-205ENST00000558735 POLR3KQ9Y2Y1 108 aaPredicted RBP9.69□□□□□ -0.86
CASC4-205ENST00000558735 H0YL77 283 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 TMEM178BH3BS89 294 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 J3QW42 95 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 ARPC3O15145 178 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 SURF4O15260 269 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 GMNNO75496 209 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 CRABP1P29762 137 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 CENPAP49450 140 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 KRT72Q14CN4 511 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 TMEM155Q4W5P6 130 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 SHISA2Q6UWI4 295 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 COLCA1Q6ZS62 124 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.68□□□□□ -0.86
CASC4-205ENST00000558735 NAA40Q86UY6 237 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 KLHL36Q8N4N3 616 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 ZDHHC22Q8N966 263 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 ATG16L2Q8NAA4 619 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 OR8G5Q8NG78 346 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 OR5L1Q8NGL2 311 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 OR13G1Q8NGZ3 307 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 C22orf15Q8WYQ4 148 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 NMNAT3Q96T66 252 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 SLC6A7Q99884 636 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 OR52D1Q9H346 318 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 TMEM165Q9HC07 324 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 PTTG3PQ9NZH4 202 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 ATPIF1Q9UII2 106 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 V9GYQ6 96 aa9.68□□□□□ -0.86
CASC4-205ENST00000558735 F5H0A9 414 aaPredicted RBP9.67□□□□□ -0.86
CASC4-205ENST00000558735 SNX3O60493 162 aa9.67□□□□□ -0.86
CASC4-205ENST00000558735 GADD45GO95257 159 aa9.67□□□□□ -0.86
CASC4-205ENST00000558735 WNT2P09544 360 aa9.67□□□□□ -0.86
CASC4-205ENST00000558735 HSD17B1P14061 328 aa9.67□□□□□ -0.86
CASC4-205ENST00000558735 HIST1H1CP16403 213 aaKnown RBP9.67□□□□□ -0.86
CASC4-205ENST00000558735 FPR2P25090 351 aa9.67□□□□□ -0.86
CASC4-205ENST00000558735 PMELP40967 661 aa9.67□□□□□ -0.86
CASC4-205ENST00000558735 RGS6P49758 472 aa9.67□□□□□ -0.86
CASC4-205ENST00000558735 SMIM11AP58511 58 aa9.67□□□□□ -0.86
CASC4-205ENST00000558735 BTG1P62324 171 aa9.67□□□□□ -0.86
CASC4-205ENST00000558735 COX10Q12887 443 aa9.67□□□□□ -0.86
CASC4-205ENST00000558735 ZNF154Q13106 437 aa9.67□□□□□ -0.86
CASC4-205ENST00000558735 KRTAP27-1Q3LI81 207 aa9.67□□□□□ -0.86
CASC4-205ENST00000558735 SLC27A4Q6P1M0 643 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms