RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 POU4F3Q15319 338 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 ZNF74Q16587 644 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 KLHL12Q53G59 568 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 IDNKQ5T6J7 187 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 SFXN4Q6P4A7 337 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 ARL9Q6T311 187 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 THSD4Q6ZMP0 1018 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 UBASH3BQ8TF42 649 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 SLC25A43Q8WUT9 341 aaPredicted RBP9.09□□□□□ -0.95
TPM1-212ENST00000558347 KLHL15Q96M94 604 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 DMRTB1Q96MA1 342 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 C7orf50Q9BRJ6 194 aaKnown RBP9.09□□□□□ -0.95
TPM1-212ENST00000558347 TMEM246Q9BRR3 403 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 POTEKPQ9BYX7 375 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 PRRG4Q9BZD6 226 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 ZCCHC4Q9H5U6 513 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 MED20Q9H944 212 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 SERINC1Q9NRX5 453 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 ZNF275Q9NSD4 429 aaPredicted RBP9.09□□□□□ -0.95
TPM1-212ENST00000558347 PAQR5Q9NXK6 330 aaPredicted RBP9.09□□□□□ -0.95
TPM1-212ENST00000558347 ABRACLQ9P1F3 81 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 MALT1Q9UDY8 824 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 CHRNA9Q9UGM1 479 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 MCTS1Q9ULC4 181 aaKnown RBP9.09□□□□□ -0.95
TPM1-212ENST00000558347 PROCRQ9UNN8 238 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 PLEKHA6Q9Y2H5 1048 aa9.09□□□□□ -0.95
TPM1-212ENST00000558347 SIRT4Q9Y6E7 314 aaPredicted RBP9.09□□□□□ -0.95
TPM1-212ENST00000558347 ITPR3Q14573 2671 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 A0A0G2JK05 382 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 A8MV72 311 aaPredicted RBP9.08□□□□□ -0.96
TPM1-212ENST00000558347 INMT-MINDY4F8WBC2 141 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 SIAH2O43255 324 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 OR2T1O43869 369 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 SS18L1O75177 396 aaPredicted RBP9.08□□□□□ -0.96
TPM1-212ENST00000558347 GATBO75879 557 aaKnown RBP9.08□□□□□ -0.96
TPM1-212ENST00000558347 NDUFB2O95178 105 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 SYNGR4O95473 234 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 MT-ATP6P00846 226 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 BGLAPP02818 100 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 HRGP04196 525 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 OR2T7P0C7T2 308 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 ASAH2BP0C7U1 165 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 FUT1P19526 365 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 PTNP21246 168 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 GZMKP49863 264 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 GBX2P52951 348 aaPredicted RBP9.08□□□□□ -0.96
TPM1-212ENST00000558347 RPS7P62081 194 aaKnown RBP9.08□□□□□ -0.96
TPM1-212ENST00000558347 RPS4XP62701 263 aaKnown RBP9.08□□□□□ -0.96
TPM1-212ENST00000558347 PITPNAQ00169 270 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 HSF2Q03933 536 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 RIPPLY1Q0D2K3 151 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 MAB21L1Q13394 359 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 CRMP1Q14194 572 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 ZNF239Q16600 458 aaKnown RBP9.08□□□□□ -0.96
TPM1-212ENST00000558347 SLC35D3Q5M8T2 416 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 C1orf140Q5VVS0 124 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 ZNF57Q68EA5 555 aaPredicted RBP9.08□□□□□ -0.96
TPM1-212ENST00000558347 C22orf34Q6ZV56 151 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 CEACAM19Q7Z692 300 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 OR4M1Q8NGD0 313 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 OR2T27Q8NH04 317 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 ROBO4Q8WZ75 1007 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 AKAP1Q92667 903 aaKnown RBP eCLIP9.08□□□□□ -0.96
TPM1-212ENST00000558347 NINJ1Q92982 152 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 DDIT4LQ96D03 193 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 KTI12Q96EK9 354 aaPredicted RBP9.08□□□□□ -0.96
TPM1-212ENST00000558347 GMPPAQ96IJ6 420 aaPredicted RBP9.08□□□□□ -0.96
TPM1-212ENST00000558347 C4orf36Q96KX1 117 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 PGLYRP3Q96LB9 341 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 WFIKKN1Q96NZ8 548 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 WACQ9BTA9 647 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 PTDSS2Q9BVG9 487 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 HCAR1Q9BXC0 346 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 SRXN1Q9BYN0 137 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 HDHD2Q9H0R4 259 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 PLEKHF2Q9H8W4 249 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 ACOXLQ9NUZ1 547 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 NLKQ9UBE8 527 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 NDRG3Q9UGV2 375 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 ZFHX3Q15911 3703 aa9.08□□□□□ -0.96
TPM1-212ENST00000558347 ABCA4P78363 2273 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 A0A0G2JMP0 313 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 A0A0X1KG70 313 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 ZC3H12DA2A288 527 aaKnown RBP9.07□□□□□ -0.96
TPM1-212ENST00000558347 NOTOA8MTQ0 251 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 J3QLW9 94 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 ARL6IP5O75915 188 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 PPP1R3DO95685 299 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 PLGP00747 810 aaPredicted RBP9.07□□□□□ -0.96
TPM1-212ENST00000558347 ARSBP15848 533 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 ZNF19P17023 458 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 RAB3BP20337 219 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 AHCYP23526 432 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 RAG2P55895 527 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 CARD18P57730 90 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 CD83Q01151 205 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 LTBQ06643 244 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 FAPQ12884 760 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 GPR176Q14439 515 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 INSL4Q14641 139 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms