RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 PPIBP23284 216 aaKnown RBP4.28□□□□□ -1.72
SPG11-208ENST00000558155 EEF1B2P24534 225 aaKnown RBP4.28□□□□□ -1.72
SPG11-208ENST00000558155 PSMB10P40306 273 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 ETV4P43268 484 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 KIR2DS4P43632 304 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 POLR2JP52435 117 aaKnown RBP4.28□□□□□ -1.72
SPG11-208ENST00000558155 ARF6P62330 175 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 RPL18Q07020 188 aaKnown RBP4.28□□□□□ -1.72
SPG11-208ENST00000558155 CD47Q08722 323 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 IFFO1Q0D2I5 559 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 C11orf91Q3C1V1 193 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 GTDC1Q4AE62 458 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 ENTPD8Q5MY95 495 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 FAM201AQ5SY85 155 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 NXNQ6DKJ4 435 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 OR2T2Q6IF00 324 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 MOGAT3Q86VF5 341 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 COMTD1Q86VU5 262 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 OR5AS1Q8N127 324 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 CELF2-AS1Q8N7Q2 184 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 PCYOX1LQ8NBM8 494 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 OR5R1Q8NH85 324 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 CFHR4Q92496 578 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 VPS33AQ96AX1 596 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 RASD2Q96D21 266 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 TECTBQ96PL2 329 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 ALG12Q9BV10 488 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 ROPN1BQ9BZX4 212 aaPredicted RBP4.28□□□□□ -1.72
SPG11-208ENST00000558155 C20orf27Q9GZN8 174 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 PPA2Q9H2U2 334 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 CENPHQ9H3R5 247 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 POFUT1Q9H488 388 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 ROPN1Q9HAT0 212 aaPredicted RBP4.28□□□□□ -1.72
SPG11-208ENST00000558155 TRIM36Q9NQ86 728 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 PNPOQ9NVS9 261 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 ZIM2Q9NZV7 527 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 HAO1Q9UJM8 370 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 VPREB3Q9UKI3 123 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 IGKV1D-43A0A0B4J1Z2 117 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 TRAV38-1A0A0B4J264 116 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 TRAPPC13A5PLN9 417 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 NPIPB13A6NJU9 1138 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 CPSF4LA6NMK7 179 aaKnown RBP4.27□□□□□ -1.73
SPG11-208ENST00000558155 EVPLLA8MZ36 301 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 NPIPB4C9JG80 1138 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 F5H5P2 479 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 J3QW42 95 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 M0QX08 132 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 SDHDO14521 159 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 HDAC3O15379 428 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 ADAM20O43506 726 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 SGCEO43556 437 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 TYROBPO43914 113 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 PAHP00439 452 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 MT-ND1P03886 318 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 MSR1P21757 451 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 FPR3P25089 353 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 PMELP40967 661 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 AQP2P41181 271 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 HTR5AP47898 357 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 RGS6P49758 472 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 TNP2Q05952 138 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 SCRN3Q0VDG4 424 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 COX10Q12887 443 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 SCARB2Q14108 478 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 NSUN5P1Q3KNT7 163 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 ARMC4Q5T2S8 1044 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 FOXB2Q5VYV0 432 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 C11orf87Q6NUJ2 197 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 C1orf94Q6P1W5 598 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 FBXW12Q6X9E4 464 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 BTN2A1Q7KYR7 527 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 IGFN1Q86VF2 1251 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 ANKRD13BQ86YJ7 626 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 PDZD9Q8IXQ8 264 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 CMTM4Q8IZR5 234 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 CLDN22Q8N7P3 220 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 C11orf44Q8N8P7 122 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 SMYD1Q8NB12 490 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 OR4F17Q8NGA8 305 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 OR10AD1Q8NGE0 317 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 OR6T1Q8NGN1 323 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 OR2T6Q8NHC8 308 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 Q8TCH9 128 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 ADAMTS16Q8TE57 1224 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.27□□□□□ -1.73
SPG11-208ENST00000558155 GTF2H4Q92759 462 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 HDAC2Q92769 488 aaKnown RBP4.27□□□□□ -1.73
SPG11-208ENST00000558155 PHF21AQ96BD5 680 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 NMD3Q96D46 503 aaKnown RBP4.27□□□□□ -1.73
SPG11-208ENST00000558155 R3HDM4Q96D70 268 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 SGTBQ96EQ0 304 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 DMRTB1Q96MA1 342 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 C16orf45Q96MC5 204 aaPredicted RBP4.27□□□□□ -1.73
SPG11-208ENST00000558155 OR4F4Q96R69 305 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 SORT1Q99523 831 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 WFDC6Q9BQY6 131 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 CPPED1Q9BRF8 314 aaPredicted RBP4.27□□□□□ -1.73
SPG11-208ENST00000558155 PAIP1Q9H074 479 aaKnown RBP4.27□□□□□ -1.73
SPG11-208ENST00000558155 FAM234AQ9H0X4 552 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms