RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 BCL2L11O43521 198 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 NDUFA2O43678 99 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 SIGLEC6O43699 453 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 AQP8O94778 261 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 PMS2P2O95744 297 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 AK1P00568 194 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 SERPINA5P05154 406 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 ZNF735P0CB33 412 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 GPR89BP0CG08 455 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 CXCR1P25024 350 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 GPR3P46089 330 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 PRSS12P56730 875 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 ZNF117Q03924 483 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 NFATC4Q14934 902 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 HFEQ30201 348 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 PAN3Q58A45 887 aaKnown RBP11.06□□□□□ -0.64
LDLR-205ENST00000557933 MOB3CQ70IA8 216 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 ZNF595Q8IYB9 648 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 OR52N4Q8NGI2 321 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 OR13C9Q8NGT0 318 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 PELOQ9BRX2 385 aaKnown RBP11.06□□□□□ -0.64
LDLR-205ENST00000557933 FAM117AQ9C073 453 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 DUSP15Q9H1R2 295 aaPredicted RBP11.06□□□□□ -0.64
LDLR-205ENST00000557933 FN3KRPQ9HA64 309 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 SOHLH2Q9NX45 425 aa11.06□□□□□ -0.64
LDLR-205ENST00000557933 TMEM218A2RU14 115 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 SULT2B1O00204 365 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 STK17BO94768 372 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 UTS2O95399 124 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 ASAH2BP0C7U1 165 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 UBBP0CG47 229 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 UBCP0CG48 685 aaKnown RBP11.05□□□□□ -0.64
LDLR-205ENST00000557933 DAOP14920 347 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 KIR2DL1P43626 348 aaPredicted RBP11.05□□□□□ -0.64
LDLR-205ENST00000557933 RPS27AP62979 156 aaKnown RBP11.05□□□□□ -0.64
LDLR-205ENST00000557933 UBA52P62987 128 aaKnown RBP11.05□□□□□ -0.64
LDLR-205ENST00000557933 HHEXQ03014 270 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 CCINQ13939 588 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 WBP2NLQ6ICG8 309 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 TMEM17Q86X19 198 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 MCATQ8IVS2 390 aaKnown RBP11.05□□□□□ -0.64
LDLR-205ENST00000557933 SLC22A18ASQ8N1D0 253 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 SLC25A32Q9H2D1 315 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 TAS2R8Q9NYW2 309 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 FBXL21Q9UKT6 434 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 MKL2Q9ULH7 1088 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 IGHV3-20A0A0C4DH32 117 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 A0A1W2PQF6 199 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 CRYBA1P05813 215 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 ACTBP60709 375 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 S100A10P60903 97 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 ACTG1P63261 375 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 SKP2Q13309 424 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 ZNF141Q15928 474 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 PABPC1L2AQ5JQF8 200 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 EEF1A1P5Q5VTE0 462 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 DCXRQ7Z4W1 244 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 OOSP2Q86WS3 158 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 KCNRGQ8N5I3 272 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 SMRP1Q8NCR6 262 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 SLC26A10Q8NG04 563 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 OR4A4PQ8NGN8 299 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 CCDC107Q8WV48 283 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 CNTD2Q9H8S5 307 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 CKLFQ9UBR5 152 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 CLDN16Q9Y5I7 305 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 A0A0J9YY10 115 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 A6NCN8 305 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 EFCAB7A8K855 629 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 ZNF264O43296 627 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 NME2P22392 152 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 CALCRP30988 508 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 NR0B1P51843 470 aaKnown RBP11.05□□□□□ -0.64
LDLR-205ENST00000557933 GFERP55789 205 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 SCRN3Q0VDG4 424 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 ELOCQ15369 112 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 NKAPLQ5M9Q1 402 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 RLN3Q8WXF3 142 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 ISOC2Q96AB3 205 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 CMTM3Q96MX0 182 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 OR8B4Q96RC9 309 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 G6PC3Q9BUM1 346 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 MFRPQ9BY79 579 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 ACKR4Q9NPB9 350 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 GLS2Q9UI32 602 aa11.05□□□□□ -0.64
LDLR-205ENST00000557933 COL6A3P12111 3177 aa11.04□□□□□ -0.64
LDLR-205ENST00000557933 H0YIZ8 118 aa11.04□□□□□ -0.64
LDLR-205ENST00000557933 MECP2P51608 486 aaKnown RBP11.04□□□□□ -0.64
LDLR-205ENST00000557933 ELAVL1Q15717 326 aaKnown RBP11.04□□□□□ -0.64
LDLR-205ENST00000557933 ARMC6Q6NXE6 501 aa11.04□□□□□ -0.64
LDLR-205ENST00000557933 NANPQ8TBE9 248 aa11.04□□□□□ -0.64
LDLR-205ENST00000557933 RPS4Y2Q8TD47 263 aa11.04□□□□□ -0.64
LDLR-205ENST00000557933 PHYHIPQ92561 330 aa11.04□□□□□ -0.64
LDLR-205ENST00000557933 LMF2Q9BU23 707 aaKnown RBP11.04□□□□□ -0.64
LDLR-205ENST00000557933 CHMP1AQ9HD42 196 aaPredicted RBP11.04□□□□□ -0.64
LDLR-205ENST00000557933 MED9Q9NWA0 146 aa11.04□□□□□ -0.64
LDLR-205ENST00000557933 OR5AC2Q9NZP5 309 aa11.04□□□□□ -0.64
LDLR-205ENST00000557933 ZFHX4Q86UP3 3567 aa11.04□□□□□ -0.64
LDLR-205ENST00000557933 TMEM269A0A1B0GVZ9 245 aa11.04□□□□□ -0.64
LDLR-205ENST00000557933 C9orf170A2RU37 121 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms