RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 TMX2-CTNND1H3BSU7 103 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 ZNF701M0R085 212 aaPredicted RBP3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 DCTN6O00399 190 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 STAMBPO95630 424 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 TSPAN13O95857 204 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 PAHP00439 452 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 LALBAP00709 142 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 CRYGCP07315 174 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 CCDC172P0C7W6 258 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 GATA1P15976 413 aaPredicted RBP3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 NPR2P20594 1047 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 IGHV1-2P23083 117 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 DCKP27707 260 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 GABRR2P28476 465 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 RPL32P62910 135 aaKnown RBP3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 MRPS22P82650 360 aaKnown RBP3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 SERTAD2Q14140 314 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 NKAIN1Q4KMZ8 207 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 FBXO48Q5FWF7 155 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 SAMD4BQ5PRF9 694 aaKnown RBP3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 C22orf42Q6IC83 251 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 ZNF836Q6ZNA1 936 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 SLC25A48Q6ZT89 311 aaKnown RBP3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 CMTM8Q8IZV2 173 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 ABHD12Q8N2K0 398 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 METTL13Q8N6R0 699 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 RHEBL1Q8TAI7 183 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 VN1R17PQ8TDU5 208 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 LRRC39Q96DD0 335 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 CCDC126Q96EE4 140 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 SLC29A1Q99808 456 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 GAL3ST1Q99999 423 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 RBM4BQ9BQ04 359 aaKnown RBP3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 MRPL45Q9BRJ2 306 aaKnown RBP3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 LRRC61Q9BV99 259 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 RACGAP1Q9H0H5 632 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 LZTFL1Q9NQ48 299 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 MIEF1Q9NQG6 463 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 N6AMT1Q9Y5N5 214 aa3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 MYO18AQ92614 2054 aaKnown RBP3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 DMBT1Q9UGM3 2413 aaPredicted RBP3.8□□□□□ -1.8
MTHFD1-216ENST00000557539 NSG1A0A0A6YYJ2 146 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 ARL5CA6NH57 179 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 FAM220BPB1ANY3 271 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 ZNF254O75437 659 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 ERLIN2O94905 339 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 TGM6O95932 706 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 RENP00797 406 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 MBP02144 154 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 MYL2P10916 166 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 VDAC1P21796 283 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 IL2RGP31785 369 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 HSD17B2P37059 387 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 VHLP40337 213 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 NAA10P41227 235 aaPredicted RBP3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 NSG1P42857 185 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 SLC1A2P43004 574 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 TMED10P49755 219 aaKnown RBP3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 DAOAP59103 153 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 CHRNB3Q05901 458 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 ELAVL2Q12926 359 aaKnown RBP3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 SELENBP1Q13228 472 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 STK11Q15831 433 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 SOHLH1Q5JUK2 328 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 FAM182AQ5T1J6 154 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 REEP3Q6NUK4 255 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 GUSBP11Q6P575 273 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 PAMR1Q6UXH9 720 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 Q6ZSR3 168 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 C18orf65Q6ZTR6 163 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 ACOT7LQ6ZUV0 252 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 USP43Q70EL4 1123 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 LINC00523Q86TU6 105 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 TMEM135Q86UB9 458 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 MS4A15Q8N5U1 240 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 PYROXD1Q8WU10 500 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 CMTM7Q96FZ5 175 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 POM121L2Q96KW2 1035 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 MS4A4EQ96PG1 132 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 OPRPNQ99935 248 aaPredicted RBP3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 TMEM59Q9BXS4 323 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 LINC00597Q9H2U6 94 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 OR51M1Q9H341 326 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 NAP1L2Q9ULW6 460 aaPredicted RBP3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 BTRCQ9Y297 605 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 STYXL1Q9Y6J8 313 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 UNC13CQ8NB66 2214 aa3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 TDRD6O60522 2096 aaKnown RBP3.79□□□□□ -1.8
MTHFD1-216ENST00000557539 MYH4Q9Y623 1939 aa3.78□□□□□ -1.8
MTHFD1-216ENST00000557539 DOCK5Q9H7D0 1870 aa3.78□□□□□ -1.8
MTHFD1-216ENST00000557539 IGKV6D-41A0A0C4DH26 115 aa3.78□□□□□ -1.8
MTHFD1-216ENST00000557539 LCE6AA0A183 80 aa3.78□□□□□ -1.8
MTHFD1-216ENST00000557539 DHRS7CA6NNS2 312 aa3.78□□□□□ -1.8
MTHFD1-216ENST00000557539 EPM2AB3EWF7 344 aa3.78□□□□□ -1.8
MTHFD1-216ENST00000557539 SHISA9B4DS77 424 aa3.78□□□□□ -1.8
MTHFD1-216ENST00000557539 NDUFS8O00217 210 aa3.78□□□□□ -1.8
MTHFD1-216ENST00000557539 BCKDKO14874 412 aa3.78□□□□□ -1.8
MTHFD1-216ENST00000557539 EDIL3O43854 480 aa3.78□□□□□ -1.8
MTHFD1-216ENST00000557539 RAD1O60671 282 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms