RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 ELF4Q99607 663 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-232ENST00000557487 UQCC2Q9BRT2 126 aa14.6□□□□□ -0.07
SHMT2-232ENST00000557487 PTDSS2Q9BVG9 487 aa14.6□□□□□ -0.07
SHMT2-232ENST00000557487 NMES1Q9C002 83 aa14.6□□□□□ -0.07
SHMT2-232ENST00000557487 CGGBP1Q9UFW8 167 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-232ENST00000557487 C11orf98E9PRG8 122 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 PRAMEF26H0Y7S4 382 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 HCRTR2O43614 444 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 NPIPB7O75200 414 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 STK17BO94768 372 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 DCNP07585 359 aaKnown RBP14.59□□□□□ -0.07
SHMT2-232ENST00000557487 PSMB6P28072 239 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 BDKRB2P30411 391 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 SCRN3Q0VDG4 424 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 PCK2Q16822 640 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 MICBQ29980 383 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 FJX1Q86VR8 437 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 OR4K17Q8NGC6 315 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 OR5AP2Q8NGF4 316 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 OR1S2Q8NGQ3 325 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 FAM174AQ8TBP5 190 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 PTPMT1Q8WUK0 201 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-232ENST00000557487 MMABQ96EY8 250 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-232ENST00000557487 CST11Q9H112 138 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 OR52A1Q9UKL2 312 aa14.59□□□□□ -0.07
SHMT2-232ENST00000557487 LOC107986453A0A1B0GWG9 222 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 DCDC2BA2VCK2 349 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 TMEM235A6NFC5 223 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 A8MVM7 634 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 ALG1L2C9J202 215 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 RAB27BO00194 218 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 ZNF208O43345 1280 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 OR2T1O43869 369 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 CRHP06850 196 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 CD79AP11912 226 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 CTLA4P16410 223 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 SRSF5Q13243 272 aaKnown RBP14.58□□□□□ -0.07
SHMT2-232ENST00000557487 AWAT2Q6E213 333 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 DHRS7BQ6IAN0 325 aaPredicted RBP14.58□□□□□ -0.07
SHMT2-232ENST00000557487 HAGHLQ6PII5 290 aaPredicted RBP14.58□□□□□ -0.07
SHMT2-232ENST00000557487 PARM1Q6UWI2 310 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 IL34Q6ZMJ4 242 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 TRAPPC6BQ86SZ2 158 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 FAM160A2Q8N612 972 aaPredicted RBP14.58□□□□□ -0.07
SHMT2-232ENST00000557487 ELP5Q8TE02 316 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 C8orf33Q9H7E9 229 aaPredicted RBP14.58□□□□□ -0.07
SHMT2-232ENST00000557487 G6PC2Q9NQR9 355 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 MBD2Q9UBB5 411 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 ZNF629Q9UEG4 869 aaPredicted RBP14.58□□□□□ -0.07
SHMT2-232ENST00000557487 MLXQ9UH92 298 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 RHBDD3Q9Y3P4 386 aa14.58□□□□□ -0.07
SHMT2-232ENST00000557487 A0A0B4J2A0 478 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 DBX1A6NMT0 343 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 C2CD4DB7Z1M9 353 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 TMEM150CB9EJG8 249 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 TO15178 435 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 HOXB1P14653 301 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-232ENST00000557487 ZNF823P16415 610 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 IL12BP29460 328 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 MRPS21P82921 87 aaKnown RBP14.58□□□□□ -0.08
SHMT2-232ENST00000557487 HFEQ30201 348 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 LRRC37A5PQ49AS3 106 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 ACTBL2Q562R1 376 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 DRAM2Q6UX65 266 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 OR13H1Q8NG92 308 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 ADIPOR1Q96A54 375 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 SEC22AQ96IW7 307 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 ADOQ96SZ5 270 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 CHRNA10Q9GZZ6 450 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 CHMP1AQ9HD42 196 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-232ENST00000557487 ASF1BQ9NVP2 202 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 SHPKQ9UHJ6 478 aa14.58□□□□□ -0.08
SHMT2-232ENST00000557487 ARHGEF17Q96PE2 2063 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-232ENST00000557487 NPIPB13A6NJU9 1138 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 NPIPB4C9JG80 1138 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 PLPP3O14495 311 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 EFSO43281 561 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 RAD1O60671 282 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 ICOSLGO75144 302 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 SNAPINO95295 136 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 IFNA6P05013 189 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 DCDP81605 110 aaKnown RBP14.57□□□□□ -0.08
SHMT2-232ENST00000557487 SPOCK1Q08629 439 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 FAM189A2Q15884 450 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 MOGAT2Q3SYC2 334 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 CORO6Q6QEF8 472 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 TMEM151BQ8IW70 566 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 BAP18Q8IXM2 172 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 SLC22A24Q8N4F4 322 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 ZNF248Q8NDW4 579 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 OR51A2Q8NGJ7 313 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 FGF14Q92915 247 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 ZNF524Q96C55 264 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 MMP26Q9NRE1 261 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 EMC9Q9Y3B6 208 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 MPDZO75970 2070 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 XIRP2A4UGR9 3374 aa14.57□□□□□ -0.08
SHMT2-232ENST00000557487 TMED7-TICAM2A0A0A6YYA0 188 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 FITM1A5D6W6 292 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 C10orf142B7Z368 130 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms