RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 NMRK1Q9NWW6 199 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 TAS2R1Q9NYW7 299 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 MARCOQ9UEW3 520 aaPredicted RBP2.47□□□□□ -2.01
VRK1-207ENST00000557352 BCAP29Q9UHQ4 241 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 ZNF221Q9UK13 617 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 PRPF19Q9UMS4 504 aaKnown RBP2.47□□□□□ -2.01
VRK1-207ENST00000557352 RPH3AQ9Y2J0 694 aaPredicted RBP2.47□□□□□ -2.01
VRK1-207ENST00000557352 AP3M1Q9Y2T2 418 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 RRP15Q9Y3B9 282 aaKnown RBP2.47□□□□□ -2.01
VRK1-207ENST00000557352 FKBP7Q9Y680 259 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 AP1M2Q9Y6Q5 423 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 DNAH14Q0VDD8 3507 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 A0A0C4DFX4 3053 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 CPAMD8Q8IZJ3 1885 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 FRYLO94915 3013 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 ZNF292O60281 2723 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 MUC6Q6W4X9 2439 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 A0A1W2PP18 115 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 A0A1W2PPV9 198 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 NCF1BA6NI72 391 aaPredicted RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 NCF1CA8MVU1 366 aaPredicted RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 E9PBE3 544 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 C11orf98E9PRG8 122 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 PSMD12O00232 456 aaPredicted RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 MANBAO00462 879 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 YKT6O15498 198 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 SSX5O60225 188 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 MGRN1O60291 552 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 DFNA5O60443 496 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 KLHL41O60662 606 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 LRP3O75074 770 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 EEDO75530 441 aaKnown RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 FOXH1O75593 365 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 BCAS2O75934 225 aaPredicted RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 OR4F21O95013 312 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 SCELO95171 688 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 GUCA1CO95843 209 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 ECDO95905 644 aaPredicted RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 CSF2P04141 144 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 IL6P05231 212 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 CAPN1P07384 714 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 IFI6P09912 130 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 C1GALT1C1LP0DN25 315 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 COX4I1P13073 169 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 NCF1P14598 390 aaPredicted RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 NQO1P15559 274 aaKnown RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 XRCC1P18887 633 aaPredicted RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 PRPS1L1P21108 318 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 AHCYP23526 432 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 PRDX3P30048 256 aaKnown RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 SHMT2P34897 504 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 MAGEA8P43361 318 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 ASMTP46597 345 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 GNPDA1P46926 289 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 PPOXP50336 477 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 MTTPP55157 894 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 FOXA1P55317 472 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 CLDN8P56748 225 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 TBPL1P62380 186 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 UBE2IP63279 158 aaKnown RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 REEP5Q00765 189 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 SEMG2Q02383 582 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 IRF8Q02556 426 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 PRDX1Q06830 199 aaKnown RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 CHIT1Q13231 466 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 ADPRMQ3LIE5 342 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 ZNF528Q3MIS6 628 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 ATP6AP1LQ52LC2 224 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 IL23RQ5VWK5 629 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 CLEC6AQ6EIG7 209 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 MED27Q6P2C8 311 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 Q6ZS52 159 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 NET1Q7Z628 596 aaPredicted RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 TSEN54Q7Z6J9 526 aaKnown RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 SLC22A16Q86VW1 577 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 THOC6Q86W42 341 aaKnown RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 PARGQ86W56 976 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 CENPSQ8N2Z9 138 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 OR8J2Q8NGG1 315 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 OR52E4Q8NGH9 312 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 SLC5A11Q8WWX8 675 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 OR1E3Q8WZA6 343 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 NEIL2Q969S2 332 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 TUBGCP3Q96CW5 907 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 STARD4Q96DR4 205 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 BMFQ96LC9 184 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 OR4K3Q96R72 315 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 OR52B2Q96RD2 323 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 TBX15Q96SF7 602 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 SERPINI1Q99574 410 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 HOPXQ9BPY8 73 aaPredicted RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 AIF1LQ9BQI0 150 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 TBC1D10AQ9BXI6 508 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 GSDMCQ9BYG8 508 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 NLNQ9BYT8 704 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 RAB33BQ9H082 229 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 CLMPQ9H6B4 373 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 ACTR8Q9H981 624 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 EFCAB1Q9HAE3 211 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms