RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CYSLTR2Q9NS75 346 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 KRT84Q9NSB2 600 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 MYEF2Q9P2K5 600 aaKnown RBP10.7□□□□□ -0.7
SLIRP-209ENST00000557342 CGGBP1Q9UFW8 167 aaPredicted RBP10.7□□□□□ -0.7
SLIRP-209ENST00000557342 RRP15Q9Y3B9 282 aaKnown RBP10.7□□□□□ -0.7
SLIRP-209ENST00000557342 COMMD3-BMI1R4GMX3 469 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 YLPM1P49750 1951 aaKnown RBP10.7□□□□□ -0.7
SLIRP-209ENST00000557342 HIVEP1P15822 2718 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 IGHV4-30-2A0A087WSY4 118 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 PLSCR5A0PG75 271 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 TVP23AA6NH52 213 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 C17orf100A8MU93 164 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 LY6HO94772 140 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 GLCEO94923 617 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 CLUP10909 449 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 NAT2P11245 290 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 DAOP14920 347 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 ENTPD1P49961 510 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 MAD2L1BPQ15013 274 aaPredicted RBP10.69□□□□□ -0.7
SLIRP-209ENST00000557342 PCGF3Q3KNV8 242 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 SPATA46Q5T0L3 261 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 TMEM154Q6P9G4 183 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 CFAP77Q6ZQR2 320 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 ZNF540Q8NDQ6 660 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 C10orf105Q8TEF2 133 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 UBASH3BQ8TF42 649 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 ZNRF4Q8WWF5 429 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 PYDC1Q8WXC3 89 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 SLC7A6Q92536 515 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 APOBEC3DQ96AK3 386 aaPredicted RBP10.69□□□□□ -0.7
SLIRP-209ENST00000557342 PIMREGQ9BSJ6 248 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 TPK1Q9H3S4 243 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 HINT3Q9NQE9 182 aaKnown RBP10.69□□□□□ -0.7
SLIRP-209ENST00000557342 CELSR1Q9NYQ6 3014 aa10.69□□□□□ -0.7
SLIRP-209ENST00000557342 ZNF469Q96JG9 3925 aaPredicted RBP10.68□□□□□ -0.7
SLIRP-209ENST00000557342 FAM183AA6NL82 134 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 ZNF593O00488 134 aaPredicted RBP10.68□□□□□ -0.7
SLIRP-209ENST00000557342 PRODHO43272 600 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 DBHP09172 617 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 SPARCP09486 303 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 GSTT1P30711 240 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 MPV17P39210 176 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 TPTEP56180 551 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 DBPQ10586 325 aaPredicted RBP10.68□□□□□ -0.7
SLIRP-209ENST00000557342 PTGES3Q15185 160 aaKnown RBP10.68□□□□□ -0.7
SLIRP-209ENST00000557342 SNAPC1Q16533 368 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 CARTPTQ16568 116 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 PCK2Q16822 640 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 ALKBH6Q3KRA9 238 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 ZMAT1Q5H9K5 638 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 SLC35D3Q5M8T2 416 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 LINC01590Q5TEZ4 76 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 TMEM236Q5W0B7 351 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 KDM4DQ6B0I6 523 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 PLBD1Q6P4A8 553 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 CLEC9AQ6UXN8 241 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 SHFQ7M4L6 423 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 ZNF786Q8N393 782 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 ZNF511Q8NB15 262 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 PTP4A1Q93096 173 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 SPTSSAQ969W0 71 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 MAP6Q96JE9 813 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 INTS14Q96SY0 518 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 OR51V1Q9H2C8 321 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 SEMA6AQ9H2E6 1030 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 MED20Q9H944 212 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 WDR76Q9H967 626 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 PNRC2Q9NPJ4 139 aaKnown RBP10.68□□□□□ -0.7
SLIRP-209ENST00000557342 NKIRAS2Q9NYR9 191 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 TVP23BQ9NYZ1 205 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 VPS13CQ709C8 3753 aa10.68□□□□□ -0.7
SLIRP-209ENST00000557342 F5H5K5 113 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 TIMM8AO60220 97 aaPredicted RBP10.67□□□□□ -0.7
SLIRP-209ENST00000557342 RAC2P15153 192 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 IGFBP5P24593 272 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 ZNF81P51508 661 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 MRPS11P82912 194 aaKnown RBP10.67□□□□□ -0.7
SLIRP-209ENST00000557342 LOXL1Q08397 574 aaPredicted RBP10.67□□□□□ -0.7
SLIRP-209ENST00000557342 TAF13Q15543 124 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 KRTAP27-1Q3LI81 207 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 KLHL12Q53G59 568 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 FAM209AQ5JX71 171 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 LYPD4Q6UWN0 246 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 DCXRQ7Z4W1 244 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 ERI1Q8IV48 349 aaKnown RBP10.67□□□□□ -0.7
SLIRP-209ENST00000557342 CPOQ8IVL8 374 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 RDH5Q92781 318 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 DIRC2Q96SL1 478 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 RBM4BQ9BQ04 359 aaKnown RBP10.67□□□□□ -0.7
SLIRP-209ENST00000557342 HCAR1Q9BXC0 346 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 GSX1Q9H4S2 264 aaPredicted RBP10.67□□□□□ -0.7
SLIRP-209ENST00000557342 MARCH7Q9H992 704 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 DDX28Q9NUL7 540 aaKnown RBP10.67□□□□□ -0.7
SLIRP-209ENST00000557342 OAZ3Q9UMX2 235 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 STARD10Q9Y365 291 aa10.67□□□□□ -0.7
SLIRP-209ENST00000557342 TANC2Q9HCD6 1990 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 VWC2LB2RUY7 222 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 ZNF878C9JN71 531 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 HEXAP06865 529 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 ACSM4P0C7M7 580 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms