RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 LAT2Q9GZY6 243 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 PIGMQ9H3S5 423 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 TMEM231Q9H6L2 316 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 CNTD2Q9H8S5 307 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 HHLA2Q9UM44 414 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 LRP4O75096 1905 aa10.2□□□□□ -0.78
SRP54-213ENST00000556994 OR6C76A6NM76 312 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 STK17BO94768 372 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 PMP2P02689 132 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 GNB3P16520 340 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 CD1CP29017 333 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 NR0B1P51843 470 aaKnown RBP10.19□□□□□ -0.78
SRP54-213ENST00000556994 SRSF4Q08170 494 aaKnown RBP10.19□□□□□ -0.78
SRP54-213ENST00000556994 VWA2Q5GFL6 755 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 DCXRQ7Z4W1 244 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 WDFY1Q8IWB7 410 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 PRSS58Q8IYP2 241 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 PAQR4Q8N4S7 273 aaPredicted RBP10.19□□□□□ -0.78
SRP54-213ENST00000556994 OR52N5Q8NH56 324 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 PHOSPHO2Q8TCD6 241 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 ROBO4Q8WZ75 1007 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 FGGYQ96C11 551 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 SELENOIQ9C0D9 397 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 SLCO5A1Q9H2Y9 848 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 ZNF768Q9H5H4 540 aaKnown RBP10.19□□□□□ -0.78
SRP54-213ENST00000556994 PTGES2Q9H7Z7 377 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 MYOZ1Q9NP98 299 aaPredicted RBP10.19□□□□□ -0.78
SRP54-213ENST00000556994 CENPMQ9NSP4 180 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 SOHLH2Q9NX45 425 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 OR52A1Q9UKL2 312 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 CFAP54Q96N23 3096 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 TMEM269A0A1B0GVZ9 245 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 TCRBV21S2A2A0A5A6 115 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 TMEM200CA6NKL6 621 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 TTLL8A6PVC2 850 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 H7C2Y5 167 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 RAB27BO00194 218 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 ZNF208O43345 1280 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 ACTL6AO96019 429 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 IL12BP29460 328 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 GNALP38405 381 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 EIF1AXP47813 144 aaKnown RBP10.19□□□□□ -0.78
SRP54-213ENST00000556994 FLI1Q01543 452 aaPredicted RBP10.19□□□□□ -0.78
SRP54-213ENST00000556994 SERTAD2Q14140 314 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 SGCBQ16585 318 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 ZNF260Q3ZCT1 412 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 SHEQ5VZ18 495 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 LPCAT3Q6P1A2 487 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 RNF144BQ7Z419 303 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 OR5AP2Q8NGF4 316 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 GPR119Q8TDV5 335 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 MITD1Q8WV92 249 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 AQP3Q92482 292 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 ZC3H10Q96K80 434 aaKnown RBP10.19□□□□□ -0.78
SRP54-213ENST00000556994 PHB2Q99623 299 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 PRRT1Q99946 306 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 TXNIPQ9H3M7 391 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 FN3KRPQ9HA64 309 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 G6PC2Q9NQR9 355 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 PRR13Q9NZ81 148 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 ZNF175Q9Y473 711 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 CSAG2Q9Y5P2 127 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 R4GMQ9 66 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 ARID1AO14497 2285 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 PCDH15Q96QU1 1955 aa10.19□□□□□ -0.78
SRP54-213ENST00000556994 A0A0B4J2A0 478 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 OR5K4A6NMS3 321 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 EFSO43281 561 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 SRSF10O75494 262 aaKnown RBP10.18□□□□□ -0.78
SRP54-213ENST00000556994 GP1BBP13224 206 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 CTHP32929 405 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 RORAP35398 523 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 UNC119Q13432 240 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 PLEKHN1Q494U1 663 aaPredicted RBP10.18□□□□□ -0.78
SRP54-213ENST00000556994 HAGHLQ6PII5 290 aaPredicted RBP10.18□□□□□ -0.78
SRP54-213ENST00000556994 CCDC36Q8IYA8 594 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 GTPBP8Q8N3Z3 284 aaPredicted RBP10.18□□□□□ -0.78
SRP54-213ENST00000556994 OR52N4Q8NGI2 321 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 OR2I1PQ8NGU4 316 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 DCUN1D4Q92564 292 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 ADIPOR1Q96A54 375 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 FOXRED1Q96CU9 486 aaPredicted RBP10.18□□□□□ -0.78
SRP54-213ENST00000556994 PHYHIPLQ96FC7 376 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 SPACA5Q96QH8 159 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 MLXQ9UH92 298 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 SHPKQ9UHJ6 478 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 TMED7-TICAM2A0A0A6YYA0 188 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 IGKV1D-43A0A0B4J1Z2 117 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 C2orf72A6NCS6 295 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 METTL21EPA6NDL7 271 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 F8W036 122 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 H0YIG0 161 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 THEGLP0DJG4 465 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 FSTP19883 344 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 SERPINF1P36955 418 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 ARRB1P49407 418 aaPredicted RBP10.18□□□□□ -0.78
SRP54-213ENST00000556994 GFERP55789 205 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 BLOC1S1P78537 153 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 GLO1Q04760 184 aa10.18□□□□□ -0.78
SRP54-213ENST00000556994 FZD2Q14332 565 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms