RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 OR2T2Q6IF00 324 aa15.31■□□□□ 0.04
VIPAS39-209ENST00000556909 SLC27A4Q6P1M0 643 aa15.31■□□□□ 0.04
VIPAS39-209ENST00000556909 TBPL2Q6SJ96 375 aa15.31■□□□□ 0.04
VIPAS39-209ENST00000556909 FBXW12Q6X9E4 464 aa15.31■□□□□ 0.04
VIPAS39-209ENST00000556909 TMPRSS11FQ6ZWK6 438 aa15.31■□□□□ 0.04
VIPAS39-209ENST00000556909 MBOAT2Q6ZWT7 520 aa15.31■□□□□ 0.04
VIPAS39-209ENST00000556909 PCYOX1LQ8NBM8 494 aa15.31■□□□□ 0.04
VIPAS39-209ENST00000556909 OR1F12Q8NHA8 337 aa15.31■□□□□ 0.04
VIPAS39-209ENST00000556909 SLITRK2Q9H156 845 aa15.31■□□□□ 0.04
VIPAS39-209ENST00000556909 TMEM165Q9HC07 324 aa15.31■□□□□ 0.04
VIPAS39-209ENST00000556909 MRGBPQ9NV56 204 aa15.31■□□□□ 0.04
VIPAS39-209ENST00000556909 PTTG3PQ9NZH4 202 aa15.31■□□□□ 0.04
VIPAS39-209ENST00000556909 MDFIC2A0A1B0GVS7 189 aa15.3■□□□□ 0.04
VIPAS39-209ENST00000556909 MLNRO43193 412 aa15.3■□□□□ 0.04
VIPAS39-209ENST00000556909 RGS6P49758 472 aa15.3■□□□□ 0.04
VIPAS39-209ENST00000556909 LSM6P62312 80 aaKnown RBP15.3■□□□□ 0.04
VIPAS39-209ENST00000556909 DEFA6Q01524 100 aa15.3■□□□□ 0.04
VIPAS39-209ENST00000556909 POU5F2Q8N7G0 328 aa15.3■□□□□ 0.04
VIPAS39-209ENST00000556909 OR8G5Q8NG78 346 aa15.3■□□□□ 0.04
VIPAS39-209ENST00000556909 OR13G1Q8NGZ3 307 aa15.3■□□□□ 0.04
VIPAS39-209ENST00000556909 SYT4Q9H2B2 425 aa15.3■□□□□ 0.04
VIPAS39-209ENST00000556909 SAR1AQ9NR31 198 aa15.3■□□□□ 0.04
VIPAS39-209ENST00000556909 GID8Q9NWU2 228 aa15.3■□□□□ 0.04
VIPAS39-209ENST00000556909 GMPR2Q9P2T1 348 aaKnown RBP15.3■□□□□ 0.04
VIPAS39-209ENST00000556909 MIOXQ9UGB7 285 aa15.3■□□□□ 0.04
VIPAS39-209ENST00000556909 ATPIF1Q9UII2 106 aa15.3■□□□□ 0.04
VIPAS39-209ENST00000556909 PRKDCP78527 4128 aaKnown RBP15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 NOTCH1P46531 2555 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 LOC100653049A0A140TA62 436 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 H0YL77 283 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 IMPA2O14732 288 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 RER1O15258 196 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 SLC16A7O60669 478 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 KRT34O76011 436 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 SDHAP31040 664 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 SRP9P49458 86 aaKnown RBP15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 SPATC1Q76KD6 591 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 MOGAT3Q86VF5 341 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 GLB1L2Q8IW92 636 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 OR5L1Q8NGL2 311 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 RAB40AQ8WXH6 277 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 TMIGD2Q96BF3 282 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 NEIL1Q96FI4 390 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 TMEM246Q9BRR3 403 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 NDEL1Q9GZM8 345 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 RERGLQ9H628 205 aa15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 NMNAT1Q9HAN9 279 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 COA3Q9Y2R0 106 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-209ENST00000556909 WNK1Q9H4A3 2382 aa15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 IGHV3-64DA0A0J9YX35 117 aa15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 KHDRBS3O75525 346 aaKnown RBP15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 ZNF682O95780 498 aa15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 OMGP23515 440 aa15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 ZNF181Q2M3W8 571 aa15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 ZNF404Q494X3 552 aa15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 IFI44LQ53G44 452 aa15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 BHLHE23Q8NDY6 225 aa15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 OR8B3Q8NGG8 313 aa15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 APOBEC3DQ96AK3 386 aaPredicted RBP15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 FAM46AQ96IP4 442 aaKnown RBP15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 PLEKHA8Q96JA3 519 aa15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 ZNF582Q96NG8 517 aaPredicted RBP15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 OR8B2Q96RD0 313 aa15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 SLC30A2Q9BRI3 323 aa15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 NRIP3Q9NQ35 241 aa15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 CMTM6Q9NX76 183 aa15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 VSX1Q9NZR4 365 aaPredicted RBP15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 TMEM5Q9Y2B1 443 aa15.28■□□□□ 0.04
VIPAS39-209ENST00000556909 IQCF6A8MYZ5 107 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 F5H5P2 479 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 HOXA3O43365 443 aaPredicted RBP15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 NDUFB2O95178 105 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 FSTL3O95633 263 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 SELEP16581 610 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 PITPNBP48739 271 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 FAM201AQ5SY85 155 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 C16orf87Q6PH81 154 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 BRD3OSQ6XYD6 125 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 PTCHD4Q6ZW05 846 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 OR10S1Q8NGN2 331 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 HSH2DQ96JZ2 352 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 GPX7Q96SL4 187 aaPredicted RBP15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 COQ7Q99807 217 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 NUDT16L1Q9BRJ7 211 aaKnown RBP15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 NUAK2Q9H093 628 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 ANKRD19PQ9H560 264 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 SIGLEC7Q9Y286 467 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 POLR1DQ9Y2S0 133 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 MMP24Q9Y5R2 645 aa15.27■□□□□ 0.04
VIPAS39-209ENST00000556909 KIR2DS1A0A191URI9 304 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 A0A1B0GWJ7 208 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 LRRC30A6NM36 301 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 CXCR6O00574 342 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 SOCS2O14508 198 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 TROVE2P10155 538 aaKnown RBP eCLIP15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 PMELP40967 661 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 SF3A3Q12874 501 aaKnown RBP eCLIP15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 KCNMB1Q16558 191 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 DEFB112Q30KQ8 113 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 GPR139Q6DWJ6 353 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms