RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 ENPP4Q9Y6X5 453 aa14.43□□□□□ -0.1
CHGA-206ENST00000556876 TRAPPC2LH3BP13 241 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 PTP4A3O75365 173 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 H1F0P07305 194 aaKnown RBP14.42□□□□□ -0.1
CHGA-206ENST00000556876 RNASE1P07998 156 aaKnown RBP14.42□□□□□ -0.1
CHGA-206ENST00000556876 WNT2P09544 360 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 IRF2P14316 349 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 CTLA4P16410 223 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 RHCEP18577 417 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 SMIM11AP58511 58 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 ECH1Q13011 328 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 MESTQ5EB52 335 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 Q6ZR03 302 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 C9orf139Q6ZV77 190 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 CELF2-AS1Q8N7Q2 184 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 OR52E2Q8NGJ4 325 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 SIGLEC11Q96RL6 698 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 FGFR1OP2Q9NVK5 253 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 CMTM6Q9NX76 183 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 AURKCQ9UQB9 309 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 SNX13Q9Y5W8 968 aa14.42□□□□□ -0.1
CHGA-206ENST00000556876 A0A1B0GUS0 222 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 CEACAM18A8MTB9 384 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 H7C1C5 153 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 J3KTA2 159 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 CDC42EP2O14613 210 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 IMPA2O14732 288 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 TXNDC12O95881 172 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 SCG5P05408 212 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 GPR4P46093 362 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 LCN6P62502 163 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 GNB2P62879 340 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 KRT72Q14CN4 511 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 KCNJ8Q15842 424 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 SLC36A3Q495N2 470 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 C1orf94Q6P1W5 598 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 ZNF771Q7L3S4 317 aaPredicted RBP14.41□□□□□ -0.1
CHGA-206ENST00000556876 SLC7A13Q8TCU3 470 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 RAB40AQ8WXH6 277 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 FAM162AQ96A26 154 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 RCN3Q96D15 328 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 HSH2DQ96JZ2 352 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 SLC22A4Q9H015 551 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 SYT4Q9H2B2 425 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 RERGLQ9H628 205 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 TMEM100Q9NV29 134 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 ZNF69Q9UC07 566 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 SIGLEC7Q9Y286 467 aa14.41□□□□□ -0.1
CHGA-206ENST00000556876 COA3Q9Y2R0 106 aaPredicted RBP14.41□□□□□ -0.1
CHGA-206ENST00000556876 IQCF6A8MYZ5 107 aa14.4□□□□□ -0.1
CHGA-206ENST00000556876 SERPINA1P01009 418 aa14.4□□□□□ -0.1
CHGA-206ENST00000556876 RPS2P15880 293 aaKnown RBP14.4□□□□□ -0.1
CHGA-206ENST00000556876 MMP16P51512 607 aa14.4□□□□□ -0.1
CHGA-206ENST00000556876 MALLQ13021 153 aa14.4□□□□□ -0.1
CHGA-206ENST00000556876 CCDC92Q53HC0 331 aaPredicted RBP14.4□□□□□ -0.1
CHGA-206ENST00000556876 TBPL2Q6SJ96 375 aa14.4□□□□□ -0.1
CHGA-206ENST00000556876 HACD2Q6Y1H2 254 aa14.4□□□□□ -0.1
CHGA-206ENST00000556876 OR8B3Q8NGG8 313 aa14.4□□□□□ -0.1
CHGA-206ENST00000556876 UPRTQ96BW1 309 aa14.4□□□□□ -0.1
CHGA-206ENST00000556876 NEIL1Q96FI4 390 aaPredicted RBP14.4□□□□□ -0.1
CHGA-206ENST00000556876 MEGF10Q96KG7 1140 aa14.4□□□□□ -0.1
CHGA-206ENST00000556876 OR8B2Q96RD0 313 aa14.4□□□□□ -0.1
CHGA-206ENST00000556876 SLC30A2Q9BRI3 323 aa14.4□□□□□ -0.1
CHGA-206ENST00000556876 SLITRK2Q9H156 845 aa14.4□□□□□ -0.1
CHGA-206ENST00000556876 TMEM165Q9HC07 324 aa14.4□□□□□ -0.1
CHGA-206ENST00000556876 KIF17Q9P2E2 1029 aa14.4□□□□□ -0.1
CHGA-206ENST00000556876 PCDHGB1Q9Y5G3 927 aa14.4□□□□□ -0.1
CHGA-206ENST00000556876 DNAJC9-AS1A6NH13 148 aa14.39□□□□□ -0.11
CHGA-206ENST00000556876 TMPRSS2O15393 492 aa14.39□□□□□ -0.11
CHGA-206ENST00000556876 H2AFXP16104 143 aaPredicted RBP14.39□□□□□ -0.11
CHGA-206ENST00000556876 GATA4P43694 442 aa14.39□□□□□ -0.11
CHGA-206ENST00000556876 SLC7A2P52569 658 aa14.39□□□□□ -0.11
CHGA-206ENST00000556876 HIST1H3AP68431 136 aa14.39□□□□□ -0.11
CHGA-206ENST00000556876 SPRNQ5BIV9 151 aa14.39□□□□□ -0.11
CHGA-206ENST00000556876 HIST2H3PS2Q5TEC6 136 aa14.39□□□□□ -0.11
CHGA-206ENST00000556876 SMARCD3Q6STE5 483 aa14.39□□□□□ -0.11
CHGA-206ENST00000556876 HIST2H3AQ71DI3 136 aa14.39□□□□□ -0.11
CHGA-206ENST00000556876 KLBQ86Z14 1044 aa14.39□□□□□ -0.11
CHGA-206ENST00000556876 OR11L1Q8NGX0 322 aa14.39□□□□□ -0.11
CHGA-206ENST00000556876 FAM46AQ96IP4 442 aaKnown RBP14.39□□□□□ -0.11
CHGA-206ENST00000556876 KCTD14Q9BQ13 255 aaPredicted RBP14.39□□□□□ -0.11
CHGA-206ENST00000556876 CDADC1Q9BWV3 514 aa14.39□□□□□ -0.11
CHGA-206ENST00000556876 NUAK2Q9H093 628 aa14.39□□□□□ -0.11
CHGA-206ENST00000556876 TRIM36Q9NQ86 728 aa14.39□□□□□ -0.11
CHGA-206ENST00000556876 DCAF16Q9NXF7 216 aa14.39□□□□□ -0.11
CHGA-206ENST00000556876 SAMD4AQ9UPU9 718 aaKnown RBP14.39□□□□□ -0.11
CHGA-206ENST00000556876 IER3IP1Q9Y5U9 82 aa14.39□□□□□ -0.11
CHGA-206ENST00000556876 DYSFO75923 2080 aa14.38□□□□□ -0.11
CHGA-206ENST00000556876 IGHV2-70DA0A0C4DH43 119 aa14.38□□□□□ -0.11
CHGA-206ENST00000556876 KIR2DS1A0A191URI9 304 aa14.38□□□□□ -0.11
CHGA-206ENST00000556876 A0A1B0GWJ7 208 aa14.38□□□□□ -0.11
CHGA-206ENST00000556876 RER1O15258 196 aa14.38□□□□□ -0.11
CHGA-206ENST00000556876 IDH3BO43837 385 aa14.38□□□□□ -0.11
CHGA-206ENST00000556876 RENP00797 406 aa14.38□□□□□ -0.11
CHGA-206ENST00000556876 LIPFP07098 398 aa14.38□□□□□ -0.11
CHGA-206ENST00000556876 COX4I1P13073 169 aa14.38□□□□□ -0.11
CHGA-206ENST00000556876 CD80P33681 288 aa14.38□□□□□ -0.11
CHGA-206ENST00000556876 IFNGR2P38484 337 aa14.38□□□□□ -0.11
CHGA-206ENST00000556876 CENPAP49450 140 aa14.38□□□□□ -0.11
CHGA-206ENST00000556876 NPY4RP50391 375 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms