RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 ARPINQ7Z6K5 226 aa10.57□□□□□ -0.72
SHMT2-223ENST00000556689 TMEM86BQ8N661 226 aa10.57□□□□□ -0.72
SHMT2-223ENST00000556689 FITM2Q8N6M3 262 aa10.57□□□□□ -0.72
SHMT2-223ENST00000556689 CLDN22Q8N7P3 220 aa10.57□□□□□ -0.72
SHMT2-223ENST00000556689 OR8B3Q8NGG8 313 aa10.57□□□□□ -0.72
SHMT2-223ENST00000556689 ZNF420Q8TAQ5 688 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-223ENST00000556689 OR8B2Q96RD0 313 aa10.57□□□□□ -0.72
SHMT2-223ENST00000556689 CGREF1Q99674 301 aa10.57□□□□□ -0.72
SHMT2-223ENST00000556689 TMEM246Q9BRR3 403 aa10.57□□□□□ -0.72
SHMT2-223ENST00000556689 CHIAQ9BZP6 476 aa10.57□□□□□ -0.72
SHMT2-223ENST00000556689 KAT8Q9H7Z6 458 aaKnown RBP10.57□□□□□ -0.72
SHMT2-223ENST00000556689 MARCH7Q9H992 704 aa10.57□□□□□ -0.72
SHMT2-223ENST00000556689 EFCAB1Q9HAE3 211 aa10.57□□□□□ -0.72
SHMT2-223ENST00000556689 SH3GLB1Q9Y371 365 aa10.57□□□□□ -0.72
SHMT2-223ENST00000556689 RNF114Q9Y508 228 aa10.57□□□□□ -0.72
SHMT2-223ENST00000556689 TANC2Q9HCD6 1990 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 A6NIZ1 184 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 OR5F1O95221 314 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 FSTL3O95633 263 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 NPPAP01160 153 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 SCG5P05408 212 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 THRBP10828 461 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 RAC2P15153 192 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 SRP9P49458 86 aaKnown RBP10.56□□□□□ -0.72
SHMT2-223ENST00000556689 KRTAP10-3P60369 221 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 CTXN1P60606 82 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 RAP1BP61224 184 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 FGF12P61328 243 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 RAP1AP62834 184 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 SCRN3Q0VDG4 424 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 PIN1Q13526 163 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-223ENST00000556689 NFYCQ13952 458 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 SELPLGQ14242 412 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 TAF9Q16594 264 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 ZSCAN26Q16670 478 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 C16orf89Q6UX73 402 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 ZNF620Q6ZNG0 422 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 CCDC80Q76M96 950 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 DHDDSQ86SQ9 333 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 OR5AS1Q8N127 324 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 ARHGAP24Q8N264 748 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 OR13G1Q8NGZ3 307 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 NSL1Q96IY1 281 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 MEGF10Q96KG7 1140 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 POLR2J2Q9GZM3 115 aaKnown RBP10.56□□□□□ -0.72
SHMT2-223ENST00000556689 POLR2J3Q9H1A7 115 aaKnown RBP10.56□□□□□ -0.72
SHMT2-223ENST00000556689 POLE4Q9NR33 117 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 HIF3AQ9Y2N7 669 aa10.56□□□□□ -0.72
SHMT2-223ENST00000556689 HTR3EA5X5Y0 456 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 LRRC30A6NM36 301 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 SGCEO43556 437 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 DOK2O60496 412 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 PITPNBP48739 271 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 ERFP50548 548 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 CRYBA2P53672 197 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 RPL15P61313 204 aaKnown RBP10.55□□□□□ -0.72
SHMT2-223ENST00000556689 ZNF181Q2M3W8 571 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 VMACQ2NL98 169 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 ZNF404Q494X3 552 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 DNAL1Q4LDG9 190 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 C1orf94Q6P1W5 598 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 IGFN1Q86VF2 1251 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 C1orf87Q8N0U7 546 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 DPP10Q8N608 796 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 OR8G5Q8NG78 346 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 OR5L1Q8NGL2 311 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 OR10A6Q8NH74 314 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 TBC1D15Q8TC07 691 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 ZNF582Q96NG8 517 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-223ENST00000556689 SH3GL1Q99961 368 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 EMC7Q9NPA0 242 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 CLN8Q9UBY8 286 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 BAG5Q9UL15 447 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 POMT1Q9Y6A1 747 aa10.55□□□□□ -0.72
SHMT2-223ENST00000556689 LOC100653049A0A140TA62 436 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 TNFRSF13BO14836 293 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-223ENST00000556689 KRT34O76011 436 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 CLPXO76031 633 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 MELTFP08582 738 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 TNFRSF1BP20333 461 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 FBLN7Q53RD9 439 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 WDR25Q64LD2 544 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-223ENST00000556689 OR2T2Q6IF00 324 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 VASH1Q7L8A9 365 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-223ENST00000556689 MOGAT3Q86VF5 341 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 C1QL4Q86Z23 238 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 LRRC75AQ8NAA5 344 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 OR10AD1Q8NGE0 317 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 LINC01006Q8NI28 216 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 SSMEM1Q8WWF3 244 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 DYRK2Q92630 601 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 MCUR1Q96AQ8 359 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 RCN3Q96D15 328 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 BPIFA2Q96DR5 249 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 PCGF1Q9BSM1 259 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 CDADC1Q9BWV3 514 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 KIF17Q9P2E2 1029 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 ASH2LQ9UBL3 628 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 AP3M1Q9Y2T2 418 aa10.54□□□□□ -0.72
SHMT2-223ENST00000556689 IGHV3-64DA0A0J9YX35 117 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms