RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 RNF121Q9H920 327 aa9.79□□□□□ -0.84
FOXN3-212ENST00000556541 SP140LQ9H930 580 aa9.79□□□□□ -0.84
FOXN3-212ENST00000556541 NOX3Q9HBY0 568 aa9.79□□□□□ -0.84
FOXN3-212ENST00000556541 PAK1IP1Q9NWT1 392 aaPredicted RBP9.79□□□□□ -0.84
FOXN3-212ENST00000556541 CHCHD3Q9NX63 227 aaKnown RBP9.79□□□□□ -0.84
FOXN3-212ENST00000556541 KLHDC2Q9Y2U9 406 aa9.79□□□□□ -0.84
FOXN3-212ENST00000556541 PRR14LQ5THK1 2151 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 METTL15A6NJ78 407 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 H3BSA7 217 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 KRT8P05787 483 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 RNF224P0DH78 156 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 ZNF35P13682 527 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 STOMP27105 288 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 GRNP28799 593 aaKnown RBP9.78□□□□□ -0.84
FOXN3-212ENST00000556541 MMP16P51512 607 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 RIDAP52758 137 aaKnown RBP9.78□□□□□ -0.84
FOXN3-212ENST00000556541 NR1H2P55055 460 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 BDH1Q02338 343 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 MVKQ03426 396 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 DBPQ10586 325 aaPredicted RBP9.78□□□□□ -0.84
FOXN3-212ENST00000556541 TBC1D28Q2M2D7 210 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 BEX5Q5H9J7 111 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 ZNF773Q6PK81 442 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 CORO6Q6QEF8 472 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 DRAM2Q6UX65 266 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 TMEM108Q6UXF1 575 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 UNQ6126/PRO20091Q6UXV3 157 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 TMPRSS11AQ6ZMR5 421 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 SVOPQ8N4V2 548 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 ZNF485Q8NCK3 441 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 CPEB3Q8NE35 698 aaKnown RBP9.78□□□□□ -0.84
FOXN3-212ENST00000556541 THEM6Q8WUY1 208 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 HTRA1Q92743 480 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 COG8Q96MW5 612 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 ALG8Q9BVK2 526 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 ISYNA1Q9NPH2 558 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 TBCCD1Q9NVR7 557 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 NPAP1Q9NZP6 1156 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 KCNN3Q9UGI6 736 aa9.78□□□□□ -0.84
FOXN3-212ENST00000556541 LRRK2Q5S007 2527 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 RTTNQ86VV8 2226 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 IGHV1-18A0A0C4DH31 117 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 PTGES3LE9PB15 166 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 SRSF10O75494 262 aaKnown RBP9.77□□□□□ -0.85
FOXN3-212ENST00000556541 MT-ND5P03915 603 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 CD1AP06126 327 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 HTR1AP08908 422 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 CECR9P0C854 216 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 PATE4P0C8F1 98 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 C21orf33P30042 268 aaPredicted RBP9.77□□□□□ -0.85
FOXN3-212ENST00000556541 APLNRP35414 380 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 KIR2DL3P43628 341 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 HTR5AP47898 357 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 TGM4P49221 684 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 GDI2P50395 445 aaKnown RBP9.77□□□□□ -0.85
FOXN3-212ENST00000556541 TPTEP56180 551 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 TAS2R43P59537 309 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 PSMA6P60900 246 aaKnown RBP9.77□□□□□ -0.85
FOXN3-212ENST00000556541 TUBA4AP68366 448 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 NAAAQ02083 359 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 RAB39AQ14964 217 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 RSPO1Q2MKA7 263 aaPredicted RBP9.77□□□□□ -0.85
FOXN3-212ENST00000556541 ZNF829Q3KNS6 432 aaPredicted RBP9.77□□□□□ -0.85
FOXN3-212ENST00000556541 CCDC58Q4VC31 144 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 NCMAPQ5T1S8 102 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 ZNF774Q6NX45 483 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 ARL9Q6T311 187 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 C22orf34Q6ZV56 151 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 SSX6Q7RTT6 188 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 FAM220AQ7Z4H9 259 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 KRT77Q7Z794 578 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 KLHL36Q8N4N3 616 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 NANOGP1Q8N7R0 232 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 SLC30A7Q8NEW0 376 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 AKR7LQ8NHP1 331 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 RPS4Y2Q8TD47 263 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 SNX33Q8WV41 574 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 FCGR1BQ92637 280 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 AMELYQ99218 206 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 RHNO1Q9BSD3 238 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 MND1Q9BWT6 205 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 C1QTNF5Q9BXJ0 243 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 ESRP2Q9H6T0 727 aaKnown RBP9.77□□□□□ -0.85
FOXN3-212ENST00000556541 ELOVL3Q9HB03 270 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 MRM2Q9UI43 246 aaKnown RBP9.77□□□□□ -0.85
FOXN3-212ENST00000556541 ZNF391Q9UJN7 358 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 ERGIC3Q9Y282 383 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 LRP12Q9Y561 859 aa9.77□□□□□ -0.85
FOXN3-212ENST00000556541 LOC100509620A0A075B734 347 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 A0A087WXM4 84 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 IGHV2OR16-5A0A0B4J2B6 119 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 FAM221AA4D161 298 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 PRR32B1ATL7 298 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 M0R135 149 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 APOL3O95236 402 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 CRYAAP02489 173 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 ADRA2AP08913 450 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 H2BFMP0C1H6 154 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 ACSM4P0C7M7 580 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 CD40P25942 277 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms