RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 FRZBQ92765 325 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 NAT6Q93015 286 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 PIK3IP1Q96FE7 263 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 SMIM10Q96HG1 83 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 JSRP1Q96MG2 331 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-221ENST00000556534 OSBPL10Q9BXB5 764 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 RPF2Q9H7B2 306 aaKnown RBP2.49□□□□□ -2.01
SCFD1-221ENST00000556534 ST3GAL6Q9Y274 331 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 ZNF835Q9Y2P0 537 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 COMMD3-BMI1R4GMX3 469 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 WDR62O43379 1518 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 LOC100653049A0A140TA62 436 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 A0A1B0GUH1 482 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 SMKR1H3BMG3 65 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 K7EMT4 169 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 ENTPD5O75356 428 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 KRT34O76011 436 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 SRP72O76094 671 aaKnown RBP2.48□□□□□ -2.01
SCFD1-221ENST00000556534 FGFR1OPO95684 399 aaKnown RBP2.48□□□□□ -2.01
SCFD1-221ENST00000556534 AIFM1O95831 613 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 MBP02144 154 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 ZNF286BP0CG31 522 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 HRH1P35367 487 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 CFHR2P36980 270 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 TNFSF9P41273 254 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 RND2P52198 227 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 SLC7A9P82251 487 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 SP4Q02446 784 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 IFT88Q13099 833 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 NCF4Q15080 339 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 RPEL1Q2QD12 228 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 TRMT5Q32P41 509 aaKnown RBP2.48□□□□□ -2.01
SCFD1-221ENST00000556534 H3F3CQ6NXT2 135 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 ASCL4Q6XD76 172 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 FAM92BQ6ZTR7 304 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 STPG2Q8N412 459 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 CA5BP1Q8WTZ4 195 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 RAB1CQ92928 201 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 OR2A5Q96R48 311 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 SPIN2AQ99865 258 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 SH3GL3Q99963 347 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 SPIN2BQ9BPZ2 258 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 GABARAPL3Q9BY60 117 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 MRPL37Q9BZE1 423 aaKnown RBP2.48□□□□□ -2.01
SCFD1-221ENST00000556534 RPP21Q9H633 154 aaKnown RBP2.48□□□□□ -2.01
SCFD1-221ENST00000556534 TMEM38AQ9H6F2 299 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 ZNF629Q9UEG4 869 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-221ENST00000556534 CD84Q9UIB8 345 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 AK9Q5TCS8 1911 aa2.48□□□□□ -2.01
SCFD1-221ENST00000556534 IGSF9BQ9UPX0 1349 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 A0A0J9YYE9 177 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 A0A1W2PRD5 423 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 TMEM120BA0PK00 339 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 HIDE1A8MVS5 230 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 INS-IGF2F8WCM5 200 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 NUPL2O15504 423 aaKnown RBP2.47□□□□□ -2.01
SCFD1-221ENST00000556534 KDELR3O43731 214 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 FKBP6O75344 327 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 FLOT1O75955 427 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 AQP8O94778 261 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 TRBC1P01850 177 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 S100A9P06702 114 aaKnown RBP2.47□□□□□ -2.01
SCFD1-221ENST00000556534 RHOXF2BP0C7M4 288 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 CISD3P0C7P0 127 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 UBTFL6P0CB48 400 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-221ENST00000556534 STAG3L2P0CL84 134 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 CT45A6P0DMU7 189 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 CT45A5P0DMU8 189 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 CT45A7P0DMV0 189 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 LCN2P80188 198 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 TWF1Q12792 350 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 GABRA6Q16445 453 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 HNRNPA1L2Q32P51 320 aaKnown RBP2.47□□□□□ -2.01
SCFD1-221ENST00000556534 CT45A1Q5HYN5 189 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 Q5W150 140 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 IGFL1Q6UW32 110 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 CBLN2Q8IUK8 224 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 LYPD1Q8N2G4 141 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 ZNF615Q8N8J6 731 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 ZNF709Q8N972 641 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 OR5T3Q8NGG3 340 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 OR4A15Q8NGL6 344 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 CT45A3Q8NHU0 189 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 MITD1Q8WV92 249 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 EEF1AKMT3Q96AZ1 226 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 SERPINB12Q96P63 405 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 TSSK3Q96PN8 268 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 CSPG4P5Q96PW8 444 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 P2RX4Q99571 388 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 CHAC1Q9BUX1 264 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 PIGUQ9H490 435 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 KCNJ16Q9NPI9 418 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 TMEM9BQ9NQ34 198 aa2.47□□□□□ -2.01
SCFD1-221ENST00000556534 YARS2Q9Y2Z4 477 aaKnown RBP2.47□□□□□ -2.01
SCFD1-221ENST00000556534 MRPS18BQ9Y676 258 aaKnown RBP2.47□□□□□ -2.01
SCFD1-221ENST00000556534 BRCA1P38398 1863 aaKnown RBP2.47□□□□□ -2.01
SCFD1-221ENST00000556534 ADGRA3Q8IWK6 1321 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 KIF26AQ9ULI4 1882 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-221ENST00000556534 TRAV39A0A0B4J263 110 aa2.46□□□□□ -2.02
SCFD1-221ENST00000556534 A0A0B4J2A0 478 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms