RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 PABPC1L2AQ5JQF8 200 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 METTL21CQ5VZV1 264 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 FOXL2NBQ6ZUU3 175 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 USP51Q70EK9 711 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 CALHM3Q86XJ0 350 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 FAM90A1Q86YD7 464 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 ZNF101Q8IZC7 436 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 KIR3DL3Q8N743 410 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 OR1J1Q8NGS3 322 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 VANGL1Q8TAA9 524 aaPredicted RBP8.44□□□□□ -1.06
SCFD1-220ENST00000556486 FNDC8Q8TC99 324 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 RAB1CQ92928 201 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 ELMOD3Q96FG2 381 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 TIMD4Q96H15 378 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 RNF121Q9H920 327 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 INIPQ9NRY2 104 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 CYSLTR2Q9NS75 346 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 BAG5Q9UL15 447 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 LOC100509620A0A075B734 347 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 MDFIC2A0A1B0GVS7 189 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 ISPDA4D126 451 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 MCIDASD6RGH6 385 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 KPNA4O00629 521 aaPredicted RBP8.43□□□□□ -1.06
SCFD1-220ENST00000556486 NPPAP01160 153 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 IGHV1-46P01743 117 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 IGHMP01871 453 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 UMPSP11172 480 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 ZNF32P17041 273 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 FUT1P19526 365 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 TUBG1P23258 451 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 AQP2P41181 271 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 HSF2Q03933 536 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 SLC9A3R2Q15599 337 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 TSTQ16762 297 aaKnown RBP8.43□□□□□ -1.06
SCFD1-220ENST00000556486 ZNF718Q3SXZ3 478 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 ZMAT1Q5H9K5 638 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 COQ5Q5HYK3 327 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 TMEM255AQ5JRV8 349 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 KLF17Q5JT82 389 aaPredicted RBP8.43□□□□□ -1.06
SCFD1-220ENST00000556486 DOK3Q7L591 496 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 SYT14Q8NB59 555 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 OR10A6Q8NH74 314 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 KLF14Q8TD94 323 aaPredicted RBP8.43□□□□□ -1.06
SCFD1-220ENST00000556486 TMEM239Q8WW34 195 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 IPCEF1Q8WWN9 437 aaPredicted RBP8.43□□□□□ -1.06
SCFD1-220ENST00000556486 SLC25A28Q96A46 364 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 TMIGD2Q96BF3 282 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 SNX22Q96L94 193 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 ATP6V1G3Q96LB4 118 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 DIRC2Q96SL1 478 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 SH3GL1Q99961 368 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 GAL3ST1Q99999 423 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 SIKE1Q9BRV8 207 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 WACQ9BTA9 647 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 ALG12Q9BV10 488 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 KCNN2Q9H2S1 579 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 TXNIPQ9H3M7 391 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 MMP26Q9NRE1 261 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 TUBG2Q9NRH3 451 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 C20orf141Q9NUB4 165 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 DECR2Q9NUI1 292 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 MRGBPQ9NV56 204 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 ZDHHC8Q9ULC8 765 aa8.43□□□□□ -1.06
SCFD1-220ENST00000556486 TANC2Q9HCD6 1990 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 IGKV1D-43A0A0B4J1Z2 117 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 PLSCR5A0PG75 271 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 ZSCAN5BA6NJL1 495 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 FXYD1O00168 92 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 F2RL2O00254 374 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 SLC2A10O95528 541 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 ANXA2P07355 339 aaKnown RBP8.42□□□□□ -1.06
SCFD1-220ENST00000556486 RNASE1P07998 156 aaKnown RBP8.42□□□□□ -1.06
SCFD1-220ENST00000556486 CST2P09228 141 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 DRD4P21917 467 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 GCH1P30793 250 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 PSG4Q00888 419 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 NFYCQ13952 458 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 ANKDD1AQ495B1 522 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 THEM4Q5T1C6 240 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 FAM205BPQ63HN1 556 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 TMEM200BQ69YZ2 307 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 NANOGP8Q6NSW7 305 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 SLC25A47Q6Q0C1 308 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 C17orf107Q6ZR85 190 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 RFPL4BQ6ZWI9 263 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 NKAIN4Q8IVV8 208 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 LRRC18Q8N456 261 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 STPG3Q8N7X2 389 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 ICA1LQ8NDH6 482 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 OR8J3Q8NGG0 315 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 PFN4Q8NHR9 129 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 SLC26A7Q8TE54 656 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 TMEM255BQ8WV15 326 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 HDAC2Q92769 488 aaKnown RBP8.42□□□□□ -1.06
SCFD1-220ENST00000556486 SGTBQ96EQ0 304 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 EGLN1Q9GZT9 426 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 CCNB1IP1Q9NPC3 277 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 EIF3KQ9UBQ5 218 aaKnown RBP8.42□□□□□ -1.06
SCFD1-220ENST00000556486 RIMS3Q9UJD0 308 aa8.42□□□□□ -1.06
SCFD1-220ENST00000556486 SH3GLB1Q9Y371 365 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms