RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 BCKDHBP21953 392 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 RPS4Y1P22090 263 aaKnown RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 CHATP28329 748 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 MAP3K8P41279 467 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 YAP1P46937 504 aaKnown RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 GABRA4P48169 554 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 DUSP3P51452 185 aaPredicted RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 MMP15P51511 669 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 BCAP31P51572 246 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 CCR4P51679 360 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 SNRPGP62308 76 aaKnown RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 HERV-K104P63124 156 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 SLC35A2P78381 396 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 BDH1Q02338 343 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 SIGLEC14Q08ET2 396 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 ZNF155Q12901 538 aaPredicted RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 GANABQ14697 944 aaKnown RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 PTGES3Q15185 160 aaKnown RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 P2RY14Q15391 338 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 LTB4RQ15722 352 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 TRMT12Q53H54 448 aaKnown RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 ENTPD8Q5MY95 495 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 DCST2Q5T1A1 773 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 MEDAGQ5VYS4 303 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 GGNBP1Q5YKI7 109 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 SLC25A25Q6KCM7 469 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 RPL13AP3Q6NVV1 102 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 C1orf94Q6P1W5 598 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 FRRS1Q6ZNA5 592 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 RASSF6Q6ZTQ3 369 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 ZNF550Q7Z398 422 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 CLVS1Q8IUQ0 354 aaPredicted RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 FOXRED2Q8IWF2 684 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 OR4N5Q8IXE1 308 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 ZNF440Q8IYI8 595 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 CDK20Q8IZL9 346 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 CYP4Z2PQ8N1L4 340 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 GTPBP8Q8N3Z3 284 aaPredicted RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 STX19Q8N4C7 294 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 DEFB119Q8N690 84 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 BMPERQ8N8U9 685 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 SCCPDHQ8NBX0 429 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 OR7G1Q8NGA0 311 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 OR4K5Q8NGD3 323 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 OR9Q2Q8NGE9 314 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 OR9A4Q8NGU2 314 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 OR6S1Q8NH40 331 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 OR51Q1Q8NH59 317 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 NDNFQ8TB73 568 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 TEX47Q8TBZ9 253 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 ZNF596Q8TC21 504 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 GPR151Q8TDV0 419 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 PHYHIPQ92561 330 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 CDS1Q92903 461 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 UCN3Q969E3 161 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 RFT1Q96AA3 541 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 PINX1Q96BK5 328 aaKnown RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 ANKRD9Q96BM1 317 aaPredicted RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 TGM7Q96PF1 710 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 TSSK2Q96PF2 358 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 SDF2Q99470 211 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 DOK1Q99704 481 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 MCHR1Q99705 422 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 LMF2Q9BU23 707 aaKnown RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 CCDC90BQ9GZT6 254 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 HOXD1Q9GZZ0 328 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 KCNN2Q9H2S1 579 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 PPP1R3EQ9H7J1 279 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 ANKRA2Q9H9E1 313 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 ELOVL3Q9HB03 270 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 TMEM27Q9HBJ8 222 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 TMEM165Q9HC07 324 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 FAM60AQ9NP50 221 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 CUTCQ9NTM9 273 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 HIF1ANQ9NWT6 349 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 MRPL22Q9NWU5 206 aaKnown RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 SLC2A8Q9NY64 477 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 CISD1Q9NZ45 108 aaKnown RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 MSRB1Q9NZV6 116 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 ZNF443Q9Y2A4 671 aaPredicted RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 RNF115Q9Y4L5 304 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 LRP12Q9Y561 859 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 TP53BP1Q12888 1972 aaPredicted RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 TRIOBPQ9H2D6 2365 aa4.5□□□□□ -1.69
SRP54-211ENST00000556445 GON4LQ3T8J9 2241 aa4.5□□□□□ -1.69
SRP54-211ENST00000556445 IGHV5-51A0A0C4DH38 117 aa4.5□□□□□ -1.69
SRP54-211ENST00000556445 TRBV4-1A0A0J9YWV2 114 aa4.5□□□□□ -1.69
SRP54-211ENST00000556445 F8VVB4 439 aa4.5□□□□□ -1.69
SRP54-211ENST00000556445 F8VWA3 439 aa4.5□□□□□ -1.69
SRP54-211ENST00000556445 H3BN98 237 aa4.5□□□□□ -1.69
SRP54-211ENST00000556445 FFAR1O14842 300 aa4.5□□□□□ -1.69
SRP54-211ENST00000556445 SCO2O43819 266 aa4.5□□□□□ -1.69
SRP54-211ENST00000556445 RGS11O94810 467 aa4.5□□□□□ -1.69
SRP54-211ENST00000556445 MBP02144 154 aa4.5□□□□□ -1.69
SRP54-211ENST00000556445 IFNA16P05015 189 aa4.5□□□□□ -1.69
SRP54-211ENST00000556445 HMGN1P05114 100 aa4.5□□□□□ -1.69
SRP54-211ENST00000556445 DCNP07585 359 aaKnown RBP4.5□□□□□ -1.69
SRP54-211ENST00000556445 TFPIP10646 304 aa4.5□□□□□ -1.69
SRP54-211ENST00000556445 MAOAP21397 527 aa4.5□□□□□ -1.69
SRP54-211ENST00000556445 CD1CP29017 333 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms