RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 PPT1P50897 306 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 AP3M2P53677 418 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 PRRX1P54821 245 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 SH3BGRP55822 239 aaPredicted RBP2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 KRTAP12-2P59991 146 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 BDH1Q02338 343 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 KIAA0141Q14154 515 aaPredicted RBP2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 TMEM187Q14656 261 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 TSC22D1Q15714 1073 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 SYPL1Q16563 259 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 KNOP1Q1ED39 458 aaKnown RBP2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 OR8G2PQ6IF36 304 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 FIP1L1Q6UN15 594 aaKnown RBP2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 CARM1Q86X55 608 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 C12orf56Q8IXR9 622 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 METTL4Q8N3J2 472 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 C2orf73Q8N5S3 287 aaPredicted RBP2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 ZSCAN4Q8NAM6 433 aaPredicted RBP2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 SYT14Q8NB59 555 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 OR5AU1Q8NGC0 362 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 AGR3Q8TD06 166 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 SLC25A36Q96CQ1 311 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 CNRIP1Q96F85 164 aaPredicted RBP2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 SH3YL1Q96HL8 342 aaPredicted RBP2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 USP28Q96RU2 1077 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 SFXN3Q9BWM7 321 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 CHRNA10Q9GZZ6 450 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 CLSTN2Q9H4D0 955 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 LRRC19Q9H756 370 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 METTL7AQ9H8H3 244 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 RAB20Q9NX57 234 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 CLCF1Q9UBD9 225 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 OR12D3Q9UGF7 316 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 CIDEBQ9UHD4 219 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 CRLS1Q9UJA2 301 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 EMCNQ9ULC0 261 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 HMCN2Q8NDA2 5059 aa2.35□□□□□ -2.03
EFCAB11-210ENST00000556078 IGKV3D-15A0A087WSY6 115 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 FAM240BA0A1B0GVZ2 78 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 C5orf63A6NC05 138 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 MFSD2BA6NFX1 497 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 C15orf61A6NNL5 157 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 NPIPA7E9PJI5 369 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 NPIPB9F8W1W9 429 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 FCN1O00602 326 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 CASQ2O14958 399 aaPredicted RBP2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 FCGR3AP08637 254 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 TACSTD2P09758 323 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 PIRTP0C851 137 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 SLC35E2P0CK97 266 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 NPIPA8P0DM63 369 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 TROVE2P10155 538 aaKnown RBP eCLIP2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 IGLL1P15814 213 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 NCK1P16333 377 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 ZNF10P21506 573 aaPredicted RBP2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 CNR1P21554 472 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 ATP5A1P25705 553 aaKnown RBP2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 RPL4P36578 427 aaKnown RBP2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 HPCAL1P37235 193 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 MAGEA8P43361 318 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 EMDP50402 254 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 EFNA4P52798 201 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 EWSR1Q01844 656 aaKnown RBP eCLIP2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 BSPH1Q075Z2 132 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 ZP4Q12836 540 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 PPP1R7Q15435 360 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 C2CD6Q53TS8 623 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 PRAMEF5Q5TYX0 476 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 PRAMEF6Q5VXH4 476 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 PYHIN1Q6K0P9 492 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 FAHD2BQ6P2I3 314 aaPredicted RBP2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 TMEM220Q6QAJ8 160 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 SBSNQ6UWP8 590 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 STAC2Q6ZMT1 411 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 TGIF2LXQ8IUE1 241 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 KLHDC8BQ8IXV7 354 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 LYG1Q8N1E2 194 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 BPIFB2Q8N4F0 458 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 LINC01555Q8NAE3 123 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 APCDD1LQ8NCL9 501 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 NFAM1Q8NET5 270 aaPredicted RBP2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 OR9K2Q8NGE7 335 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 OR5D13Q8NGL4 314 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 ZNF519Q8TB69 540 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 FAM81AQ8TBF8 368 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 BRSK1Q8TDC3 778 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 KCTD4Q8WVF5 259 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 DLX4Q92988 240 aaPredicted RBP2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 FAHD2AQ96GK7 314 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 PKNOX2Q96KN3 472 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 FAM218AQ96MZ4 157 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 TSNARE1Q96NA8 513 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 RCHY1Q96PM5 261 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 PYGO2Q9BRQ0 406 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 SPATA16Q9BXB7 569 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 UGT2B28Q9BY64 529 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 GPR61Q9BZJ8 451 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 COMMD4Q9H0A8 199 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 MAGT1Q9H0U3 335 aa2.34□□□□□ -2.03
EFCAB11-210ENST00000556078 SLC25A51Q9H1U9 297 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms