RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 AMELYQ99218 206 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 TBX5Q99593 518 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 KCNJ15Q99712 375 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 ZNF649Q9BS31 505 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 CDCA4Q9BXL8 241 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 ESRP2Q9H6T0 727 aaKnown RBP10.83□□□□□ -0.68
SHMT2-221ENST00000555773 ERVK13-1Q9NX77 482 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 SLCO1C1Q9NYB5 712 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 ERGIC3Q9Y282 383 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 KLHDC2Q9Y2U9 406 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 CAB39Q9Y376 341 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-221ENST00000555773 FASNP49327 2511 aaKnown RBP10.83□□□□□ -0.68
SHMT2-221ENST00000555773 IGHV1-18A0A0C4DH31 117 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 METTL15A6NJ78 407 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 M0R1B8 84 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 GOSR1O95249 250 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 TNFAIP8O95379 198 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 CRYAAP02489 173 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 KRT8P05787 483 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 CECR9P0C854 216 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 LIMS3P0CW19 117 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 LIMS4P0CW20 117 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 CD40P25942 277 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 APEX1P27695 318 aaKnown RBP10.82□□□□□ -0.68
SHMT2-221ENST00000555773 C21orf33P30042 268 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-221ENST00000555773 OTX1P32242 354 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-221ENST00000555773 NR1H2P55055 460 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 TPTEP56180 551 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 SNTB1Q13884 538 aaKnown RBP10.82□□□□□ -0.68
SHMT2-221ENST00000555773 DAZAP2Q15038 168 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-221ENST00000555773 RSPO1Q2MKA7 263 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-221ENST00000555773 KRTAP27-1Q3LI81 207 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 KCTD21Q4G0X4 260 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 CDONQ4KMG0 1287 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 BEX5Q5H9J7 111 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 SP5Q6BEB4 398 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-221ENST00000555773 UNQ6126/PRO20091Q6UXV3 157 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 MEX3BQ6ZN04 569 aaKnown RBP10.82□□□□□ -0.68
SHMT2-221ENST00000555773 LHFPL3Q86UP9 236 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 HAVCR2Q8TDQ0 301 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 MS4A3Q96HJ5 214 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 RADILQ96JH8 1075 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 RHNO1Q9BSD3 238 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 ALG8Q9BVK2 526 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 SP140LQ9H930 580 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 ELOVL3Q9HB03 270 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 PAK1IP1Q9NWT1 392 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-221ENST00000555773 NPAP1Q9NZP6 1156 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 CRIM1Q9NZV1 1036 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 ERVK-18Q9QC07 812 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 KCNN3Q9UGI6 736 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 IKZF2Q9UKS7 526 aa10.82□□□□□ -0.68
SHMT2-221ENST00000555773 LOC100509620A0A075B734 347 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 TMEM129A0AVI4 362 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 C5orf49A4QMS7 147 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 DPRXA6NFQ7 191 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 TRIM64A6NGJ6 449 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 ACOD1A6NK06 481 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 CLDN1O95832 211 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 ZNF35P13682 527 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 HSD11B1P28845 292 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 PCSK6P29122 969 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 RGS6P49758 472 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 ETV1P50549 477 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 RIDAP52758 137 aaKnown RBP10.81□□□□□ -0.68
SHMT2-221ENST00000555773 GALK2Q01415 458 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 NAAAQ02083 359 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 MVKQ03426 396 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 MRPL28Q13084 256 aaKnown RBP10.81□□□□□ -0.68
SHMT2-221ENST00000555773 NCMAPQ5T1S8 102 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 DRAM2Q6UX65 266 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 LRRN1Q6UXK5 716 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 SPATC1Q76KD6 591 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 SSX6Q7RTT6 188 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 C1orf174Q8IYL3 243 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 KLHL36Q8N4N3 616 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 NANOGP1Q8N7R0 232 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 OR52N1Q8NH53 320 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 SIGLEC11Q96RL6 698 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 KCNS3Q9BQ31 491 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 CDH20Q9HBT6 801 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 EIF3KQ9UBQ5 218 aaKnown RBP10.81□□□□□ -0.68
SHMT2-221ENST00000555773 MRM2Q9UI43 246 aaKnown RBP10.81□□□□□ -0.68
SHMT2-221ENST00000555773 SPEF1Q9Y4P9 236 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 ADGRG4Q8IZF6 3080 aa10.81□□□□□ -0.68
SHMT2-221ENST00000555773 PRR32B1ATL7 298 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 F5H5K5 113 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 J3QW42 95 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 M0R135 149 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 ICMTO60725 284 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 ABHD16AO95870 558 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 MT-ND5P03915 603 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 CELA3BP08861 270 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 ACSM4P0C7M7 580 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 CCNOP22674 350 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 TUBG1P23258 451 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 RAD52P43351 418 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 MMP16P51512 607 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 IRF3Q14653 427 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 FAM220AQ7Z4H9 259 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms