RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 TRIM64A6NGJ6 449 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 M0R135 149 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 ZG16O60844 167 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 RPP14O95059 124 aaKnown RBP9.78□□□□□ -0.84
SHMT2-220ENST00000555634 PSMA1P25786 263 aaKnown RBP9.78□□□□□ -0.84
SHMT2-220ENST00000555634 STOMP27105 288 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 TTKP33981 857 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 OPRL1P41146 370 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 RGS6P49758 472 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 IDH3GP51553 393 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-220ENST00000555634 HCCSP53701 268 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 EMX1Q04741 257 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-220ENST00000555634 DBPQ10586 325 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-220ENST00000555634 MLLT11Q13015 90 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-220ENST00000555634 TIGD6Q17RP2 521 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 C3orf36Q3SXR2 165 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 TIMM50Q3ZCQ8 353 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 OTPQ5XKR4 325 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 ALKBH2Q6NS38 261 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 ZNF774Q6NX45 483 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 DRAM2Q6UX65 266 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 TMEM108Q6UXF1 575 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 GPR141Q7Z602 305 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 MDP1Q86V88 176 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 SLC30A7Q8NEW0 376 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 IL17RDQ8NFM7 739 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 AKR7LQ8NHP1 331 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 ZNF799Q96GE5 643 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 MAP6Q96JE9 813 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 ELOVL3Q9HB03 270 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 BABAM2Q9NXR7 383 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 KLHDC2Q9Y2U9 406 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 SPEF1Q9Y4P9 236 aa9.78□□□□□ -0.84
SHMT2-220ENST00000555634 HIVEP3Q5T1R4 2406 aa9.77□□□□□ -0.84
SHMT2-220ENST00000555634 TRBV2A0A0J9YWF9 115 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 TMEM269A0A1B0GVZ9 245 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 C5orf49A4QMS7 147 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 NKX2-6A6NCS4 301 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 TMEM212A6NML5 194 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 F5H5K5 113 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 J3QW42 95 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 PSMD9O00233 223 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 CASKO14936 926 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 ABHD16AO95870 558 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 SERPINA5P05154 406 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 MMP7P09237 267 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-220ENST00000555634 UBCP0CG48 685 aaKnown RBP9.77□□□□□ -0.85
SHMT2-220ENST00000555634 CBR1P16152 277 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 CCNOP22674 350 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 MAP2K4P45985 399 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 TGM4P49221 684 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 FOXG1P55316 489 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-220ENST00000555634 TUBA1BP68363 451 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 HIST1H3AP68431 136 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 PSG4Q00888 419 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 FAM27E3Q08E93 113 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 MALLQ13021 153 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 IRF3Q14653 427 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 TRAM1Q15629 374 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 TSC22D1Q15714 1073 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 HIST2H3PS2Q5TEC6 136 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 OR2G6Q5TZ20 316 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 UBE2UQ5VVX9 321 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 HIST2H3AQ71DI3 136 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 TUBA1AQ71U36 451 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 SSX6Q7RTT6 188 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 KLBQ86Z14 1044 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 LIX1LQ8IVB5 337 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 C1orf174Q8IYL3 243 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 RFLNBQ8N5W9 214 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 FAM169BQ8N8A8 192 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 OR52H1Q8NGJ2 320 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 OR5L1Q8NGL2 311 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 SMAP2Q8WU79 429 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-220ENST00000555634 GATAD2BQ8WXI9 593 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 PGAM5Q96HS1 289 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 SIGLEC11Q96RL6 698 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 MGLLQ99685 303 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 OR10A2Q9H208 303 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 OPA3Q9H6K4 179 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 ISYNA1Q9NPH2 558 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 SLCO1C1Q9NYB5 712 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 ZNF391Q9UJN7 358 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 R4GMQ9 66 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 PCNX1Q96RV3 2341 aa9.77□□□□□ -0.85
SHMT2-220ENST00000555634 CFAP46Q8IYW2 2715 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 A0A1W2PR80 420 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 TUBAL3A6NHL2 446 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 ACOD1A6NK06 481 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 M0R1B8 84 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 CCRL2O00421 344 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 TBX1O43435 398 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 SYNGR3O43761 229 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 GPRIN2O60269 458 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 SERPINA3P01011 423 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 CRYAAP02489 173 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 SCG5P05408 212 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 PATE4P0C8F1 98 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 SMIM18P0DKX4 95 aa9.76□□□□□ -0.85
SHMT2-220ENST00000555634 ZNF12P17014 697 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms