RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PAHP00439 452 aa1.05□□□□□ -2.24
SNX6-204ENST00000555541 ETS2P15036 469 aa1.05□□□□□ -2.24
SNX6-204ENST00000555541 TCP1P17987 556 aaKnown RBP1.05□□□□□ -2.24
SNX6-204ENST00000555541 GPX4P36969 197 aaPredicted RBP1.05□□□□□ -2.24
SNX6-204ENST00000555541 PRR3P79522 188 aaKnown RBP1.05□□□□□ -2.24
SNX6-204ENST00000555541 GK3PQ14409 553 aa1.05□□□□□ -2.24
SNX6-204ENST00000555541 PDK3Q15120 406 aa1.05□□□□□ -2.24
SNX6-204ENST00000555541 SOHLH1Q5JUK2 328 aa1.05□□□□□ -2.24
SNX6-204ENST00000555541 MED27Q6P2C8 311 aa1.05□□□□□ -2.24
SNX6-204ENST00000555541 PRSS54Q6PEW0 395 aa1.05□□□□□ -2.24
SNX6-204ENST00000555541 LRRC75A-AS1Q8N1F1 130 aa1.05□□□□□ -2.24
SNX6-204ENST00000555541 MS4A15Q8N5U1 240 aa1.05□□□□□ -2.24
SNX6-204ENST00000555541 OR10AD1Q8NGE0 317 aa1.05□□□□□ -2.24
SNX6-204ENST00000555541 DCPSQ96C86 337 aaKnown RBP1.05□□□□□ -2.24
SNX6-204ENST00000555541 PKNOX2Q96KN3 472 aa1.05□□□□□ -2.24
SNX6-204ENST00000555541 C16orf45Q96MC5 204 aaPredicted RBP1.05□□□□□ -2.24
SNX6-204ENST00000555541 SAMD10Q9BYL1 202 aa1.05□□□□□ -2.24
SNX6-204ENST00000555541 TAS2R1Q9NYW7 299 aa1.05□□□□□ -2.24
SNX6-204ENST00000555541 DDX49Q9Y6V7 483 aaKnown RBP1.05□□□□□ -2.24
SNX6-204ENST00000555541 ADGRA3Q8IWK6 1321 aa1.05□□□□□ -2.24
SNX6-204ENST00000555541 PLIN3O60664 434 aa1.04□□□□□ -2.24
SNX6-204ENST00000555541 CRYGBP07316 175 aa1.04□□□□□ -2.24
SNX6-204ENST00000555541 ZNF250P15622 560 aa1.04□□□□□ -2.24
SNX6-204ENST00000555541 FUSP35637 526 aaKnown RBP eCLIP1.04□□□□□ -2.24
SNX6-204ENST00000555541 GALR1P47211 349 aa1.04□□□□□ -2.24
SNX6-204ENST00000555541 BPIFB3P59826 476 aa1.04□□□□□ -2.24
SNX6-204ENST00000555541 RPL23P62829 140 aaKnown RBP1.04□□□□□ -2.24
SNX6-204ENST00000555541 KCNJ2P63252 427 aa1.04□□□□□ -2.24
SNX6-204ENST00000555541 CDC37Q16543 378 aaPredicted RBP1.04□□□□□ -2.24
SNX6-204ENST00000555541 TBPL2Q6SJ96 375 aa1.04□□□□□ -2.24
SNX6-204ENST00000555541 SDR9C7Q8NEX9 313 aa1.04□□□□□ -2.24
SNX6-204ENST00000555541 OR11H7Q8NGC8 314 aa1.04□□□□□ -2.24
SNX6-204ENST00000555541 N4BP2L2Q92802 583 aaPredicted RBP1.04□□□□□ -2.24
SNX6-204ENST00000555541 TMEM159Q96B96 161 aa1.04□□□□□ -2.24
SNX6-204ENST00000555541 LINC00574Q9H8X3 128 aa1.04□□□□□ -2.24
SNX6-204ENST00000555541 RHBDL2Q9NX52 303 aa1.04□□□□□ -2.24
SNX6-204ENST00000555541 R4GN34 69 aa1.04□□□□□ -2.24
SNX6-204ENST00000555541 IGKV1-8A0A0C4DH67 115 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 GLYATL1P3A0A0U1RQE8 302 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 GABRR3A8MPY1 467 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 C3orf84H3BNL1 204 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 ZNF208O43345 1280 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 RDH16O75452 317 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 B3GALNT1O75752 331 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 CLPXO76031 633 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 CLIC3O95833 236 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 IGLV2-8P01709 118 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 IGLV7-43P04211 117 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 CD37P11049 281 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 ERGP11308 486 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 KITLGP21583 273 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 IFNA8P32881 189 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 OR7A5Q15622 319 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 CCDC152Q4G0S7 254 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 ZFAND6Q6FIF0 208 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 SLC25A24Q6NUK1 477 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 WDR59Q6PJI9 974 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 SPNS3Q6ZMD2 512 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 NKAIN4Q8IVV8 208 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 STK40Q8N2I9 435 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 STEAP2Q8NFT2 490 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 OR2A1Q8NGT9 310 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 PLPPR1Q8TBJ4 325 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 LRRC29Q8WV35 223 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 CSNK1G1Q9HCP0 422 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 PARP11Q9NR21 331 aa1.03□□□□□ -2.24
SNX6-204ENST00000555541 LSM7Q9UK45 103 aaKnown RBP1.03□□□□□ -2.24
SNX6-204ENST00000555541 HELZ2Q9BYK8 2649 aaKnown RBP1.02□□□□□ -2.25
SNX6-204ENST00000555541 CLRN2A0PK11 232 aa1.02□□□□□ -2.25
SNX6-204ENST00000555541 PCP4L1A6NKN8 68 aa1.02□□□□□ -2.25
SNX6-204ENST00000555541 NDUFC2-KCTD14E9PQ53 114 aa1.02□□□□□ -2.25
SNX6-204ENST00000555541 NUPL2O15504 423 aaKnown RBP1.02□□□□□ -2.25
SNX6-204ENST00000555541 ARL14EPLP0DKL9 152 aa1.02□□□□□ -2.25
SNX6-204ENST00000555541 CSNK1EP49674 416 aaKnown RBP1.02□□□□□ -2.25
SNX6-204ENST00000555541 SEC61GP60059 68 aa1.02□□□□□ -2.25
SNX6-204ENST00000555541 POLR2FP61218 127 aaKnown RBP1.02□□□□□ -2.25
SNX6-204ENST00000555541 DMC1Q14565 340 aa1.02□□□□□ -2.25
SNX6-204ENST00000555541 IMMTQ16891 758 aaKnown RBP1.02□□□□□ -2.25
SNX6-204ENST00000555541 KRTAP21-3Q3LHN1 58 aa1.02□□□□□ -2.25
SNX6-204ENST00000555541 CFAP157Q5JU67 520 aa1.02□□□□□ -2.25
SNX6-204ENST00000555541 OR4M1Q8NGD0 313 aa1.02□□□□□ -2.25
SNX6-204ENST00000555541 RAB23Q9ULC3 237 aa1.02□□□□□ -2.25
SNX6-204ENST00000555541 COL22A1Q8NFW1 1626 aaPredicted RBP1.01□□□□□ -2.25
SNX6-204ENST00000555541 KMT2BQ9UMN6 2715 aaPredicted RBP1.01□□□□□ -2.25
SNX6-204ENST00000555541 ZBED9Q6R2W3 1325 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 A0A1B0GUH1 482 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 BTBD17A6NE02 478 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 E7EQL1 145 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 NVLO15381 856 aaKnown RBP1.01□□□□□ -2.25
SNX6-204ENST00000555541 EIF4E2O60573 245 aaKnown RBP1.01□□□□□ -2.25
SNX6-204ENST00000555541 PRB1P04280 392 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 EIF4EP06730 217 aaKnown RBP1.01□□□□□ -2.25
SNX6-204ENST00000555541 ACSM4P0C7M7 580 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 PABPC4LP0CB38 370 aaKnown RBP1.01□□□□□ -2.25
SNX6-204ENST00000555541 CHMLP26374 656 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 TGM3Q08188 693 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 PPIDQ08752 370 aaKnown RBP1.01□□□□□ -2.25
SNX6-204ENST00000555541 SIGLEC14Q08ET2 396 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 ZNF726P1Q15940 193 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 KLHL12Q53G59 568 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms