RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 HOXC4P09017 264 aaPredicted RBP3.96□□□□□ -1.78
VRK1-203ENST00000555067 IGKV1-13P0DP09 117 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 RAB4AP20338 218 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 AQP1P29972 269 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 HCAR3P49019 387 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 RAB7AP51149 207 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 RPL31P62899 125 aaKnown RBP3.96□□□□□ -1.78
VRK1-203ENST00000555067 SEMG2Q02383 582 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 CD300CQ08708 224 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 TWF1Q12792 350 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 PON2Q15165 354 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 OR7A5Q15622 319 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 EXOC3L4Q17RC7 722 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 NHLRC3Q5JS37 347 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 ACTL10Q5JWF8 245 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 LEMD1Q68G75 181 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 C11orf71Q6IPW1 123 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 CXCL17Q6UXB2 119 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 WDR82Q6UXN9 313 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 FAM151BQ6UXP7 276 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 AHSA2Q719I0 299 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 SSX6Q7RTT6 188 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 PAGE2Q7Z2X7 111 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 FUNDC1Q8IVP5 155 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 SKA3Q8IX90 412 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 KRT222Q8N1A0 295 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 OR6T1Q8NGN1 323 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 OR10R2Q8NGX6 335 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 ARPC1AQ92747 370 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 FAM122AQ96E09 287 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 APOL2Q9BQE5 337 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 CALN1Q9BXU9 219 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 SAV1Q9H4B6 383 aaPredicted RBP3.96□□□□□ -1.78
VRK1-203ENST00000555067 TUBB1Q9H4B7 451 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 WDR54Q9H977 334 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 KCNJ16Q9NPI9 418 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 TMEM9BQ9NQ34 198 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 TREM2Q9NZC2 230 aa3.96□□□□□ -1.78
VRK1-203ENST00000555067 A0A0A6YYH2 397 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 A6NJ64 397 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 FAM166BA8MTA8 275 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 SEC14L6B5MCN3 397 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 CLDN34H7C241 214 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 LIN7AO14910 233 aaPredicted RBP3.95□□□□□ -1.78
VRK1-203ENST00000555067 RAD51CO43502 376 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 ENSAO43768 121 aaKnown RBP3.95□□□□□ -1.78
VRK1-203ENST00000555067 ALOX12BO75342 701 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 VENTXO95231 258 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 AHSA1O95433 338 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 SLC35E2P0CK97 266 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 CALM1P0DP23 149 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 CALM2P0DP24 149 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 CALM3P0DP25 149 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 HLA-GP17693 338 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 TCP1P17987 556 aaKnown RBP3.95□□□□□ -1.78
VRK1-203ENST00000555067 HOXA6P31267 233 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 BTCP35070 178 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 MAGEA3P43357 314 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 APOC4P55056 127 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 TAS2R60P59551 318 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 TGFBR3Q03167 851 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 DYNC1I2Q13409 638 aaKnown RBP3.95□□□□□ -1.78
VRK1-203ENST00000555067 TPTE2P1Q5T6R2 138 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 DCXRQ7Z4W1 244 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 HORMAD1Q86X24 394 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 C11orf53Q8IXP5 236 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 ZFP41Q8N8Y5 198 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 NECAP1Q8NC96 275 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 NPRL2Q8WTW4 380 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 PIK3IP1Q96FE7 263 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 ZNF681Q96N22 645 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 MCCC1Q96RQ3 725 aaPredicted RBP3.95□□□□□ -1.78
VRK1-203ENST00000555067 HIST1H4GQ99525 98 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 ATF6BQ99941 703 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 LRRC19Q9H756 370 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 TMBIM4Q9HC24 238 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 ISYNA1Q9NPH2 558 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 VAPAQ9P0L0 249 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 DHRS4-AS1Q9P1J3 65 aa3.95□□□□□ -1.78
VRK1-203ENST00000555067 IGHV1OR15-1A0A075B7D0 117 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 NCBP2LA6PVI3 153 aaKnown RBP3.94□□□□□ -1.78
VRK1-203ENST00000555067 C12orf77C9JDV5 145 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 ANKRD63C9JTQ0 380 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 SULT1C2O00338 296 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 HCRTR1O43613 425 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 PSIP1O75475 530 aaKnown RBP3.94□□□□□ -1.78
VRK1-203ENST00000555067 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 PTTG1O95997 202 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 TIMP1P01033 207 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 SMIM10L1P0DMW3 83 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 LIPCP11150 499 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 IGFBP3P17936 291 aaPredicted RBP3.94□□□□□ -1.78
VRK1-203ENST00000555067 HOXA9P31269 272 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 GLP1RP43220 463 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 RND2P52198 227 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 PITPNAQ00169 270 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 ZNF763Q0D2J5 394 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 TFDP2Q14188 446 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 BCL2A1Q16548 175 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 CPTPQ5TA50 214 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms