RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 PTGES3LE9PB15 166 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 PLPP3O14495 311 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 WNT9BO14905 357 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 NCR1O76036 304 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 MT-ND2P03891 347 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 CD14P08571 375 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 PATE4P0C8F1 98 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 IFNGR1P15260 489 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 ZNF3P17036 446 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 PCMT1P22061 227 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 PAICSP22234 425 aaKnown RBP9.07□□□□□ -0.96
SHMT2-215ENST00000554656 GTF2A1P52655 376 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-215ENST00000554656 ZNF91Q05481 1191 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 PUDPQ08623 228 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 RAB40BQ12829 278 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 ZP4Q12836 540 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 GSG1Q2KHT4 349 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 CLEC12AQ5QGZ9 265 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 GPR139Q6DWJ6 353 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 AHSA2Q719I0 299 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 GPR141Q7Z602 305 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 ZNF584Q8IVC4 421 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 CCDC36Q8IYA8 594 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 STX19Q8N4C7 294 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 LINC01356Q8N9X3 169 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 OR5J2Q8NH18 312 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 HPS1Q92902 700 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 ZNF582Q96NG8 517 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-215ENST00000554656 SYT3Q9BQG1 590 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 CDCA4Q9BXL8 241 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 ULBP2Q9BZM5 246 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 RACGAP1Q9H0H5 632 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 FGF20Q9NP95 211 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-215ENST00000554656 DNAJC27Q9NZQ0 273 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 H2AFY2Q9P0M6 372 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-215ENST00000554656 AASSQ9UDR5 926 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 FZR1Q9UM11 496 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 CMAHPQ9Y471 501 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 NOX1Q9Y5S8 564 aa9.07□□□□□ -0.96
SHMT2-215ENST00000554656 SLC22A31A6NKX4 558 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 PRR23D1E9PI22 279 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-215ENST00000554656 C11orf98E9PRG8 122 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 ZNF701M0R085 212 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-215ENST00000554656 M0R129 80 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 M0R233 179 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 SYNGR3O43761 229 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 SERPINI2O75830 405 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 HPXP02790 462 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 PRR23D2P0DMB1 279 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-215ENST00000554656 DBTP11182 482 aaKnown RBP9.06□□□□□ -0.96
SHMT2-215ENST00000554656 DCKP27707 260 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 HTR1FP30939 366 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 RPL4P36578 427 aaKnown RBP9.06□□□□□ -0.96
SHMT2-215ENST00000554656 ALDH3B1P43353 468 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 EVX1P49640 407 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 ST3GAL4Q11206 333 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 PMS2P3Q13401 168 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 IRF3Q14653 427 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 RAB39AQ14964 217 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 ALG10Q5BKT4 473 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 UBE2UQ5VVX9 321 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 XAF1Q6GPH4 301 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 PAQR4Q8N4S7 273 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-215ENST00000554656 C10orf53Q8N6V4 93 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 LRRC75AQ8NAA5 344 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 IL17RDQ8NFM7 739 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 YIPF5Q969M3 257 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 MUL1Q969V5 352 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 ERMAPQ96PL5 475 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-215ENST00000554656 FOXB1Q99853 325 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 JAM3Q9BX67 310 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 ASPNQ9BXN1 380 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 CCDC90BQ9GZT6 254 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 HINT3Q9NQE9 182 aaKnown RBP9.06□□□□□ -0.96
SHMT2-215ENST00000554656 ERVK-18Q9QC07 812 aa9.06□□□□□ -0.96
SHMT2-215ENST00000554656 WARS2Q9UGM6 360 aaKnown RBP9.06□□□□□ -0.96
SHMT2-215ENST00000554656 FBXO9Q9UK97 447 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-215ENST00000554656 DIMT1Q9UNQ2 313 aaKnown RBP9.06□□□□□ -0.96
SHMT2-215ENST00000554656 DYSFO75923 2080 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 FAM157AC9JC47 383 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 MCIDASD6RGH6 385 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 RP2O75695 350 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 PPP1R3DO95685 299 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 IGHMP01871 453 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 ERCC1P07992 297 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-215ENST00000554656 COL8A2P25067 703 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 NOS3P29474 1203 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 SDHAP31040 664 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 GLRXP35754 106 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 MTNR1AP48039 350 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 DVL1P1P54792 670 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-215ENST00000554656 BIDP55957 195 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 EMX1Q04741 257 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-215ENST00000554656 RPL18Q07020 188 aaKnown RBP9.05□□□□□ -0.96
SHMT2-215ENST00000554656 SLC35D3Q5M8T2 416 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 ZNF362Q5T0B9 420 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-215ENST00000554656 SYT6Q5T7P8 510 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-215ENST00000554656 LRFN4Q6PJG9 635 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 FAM122BQ7Z309 247 aa9.05□□□□□ -0.96
SHMT2-215ENST00000554656 PXKQ7Z7A4 578 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms