RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 ZNF45Q02386 682 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 ALG10Q5BKT4 473 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 SLC22A25Q6T423 547 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 Q6ZNX1 250 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 CREB3L2Q70SY1 520 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 FAM122BQ7Z309 247 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 NANOGNBQ7Z5D8 188 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 BIVMQ86UB2 503 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 KDM8Q8N371 416 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 C17orf78Q8N4C9 275 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 C10orf53Q8N6V4 93 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 NPEPL1Q8NDH3 523 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 C1orf162Q8NEQ5 155 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-214ENST00000554604 SDR9C7Q8NEX9 313 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 OR6S1Q8NH40 331 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 MOSPD2Q8NHP6 518 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 KCTD7Q96MP8 289 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 MOGAT1Q96PD6 335 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 KATNB1Q9BVA0 655 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 PTDSS2Q9BVG9 487 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 C1QTNF6Q9BXI9 259 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 NUAK2Q9H093 628 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 BABAM2Q9NXR7 383 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 CISD1Q9NZ45 108 aaKnown RBP10.86□□□□□ -0.67
SHMT2-214ENST00000554604 AMDHD2Q9Y303 409 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 SLC25A15Q9Y619 301 aa10.86□□□□□ -0.67
SHMT2-214ENST00000554604 IQCMA0A1B0GVH7 501 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 SULT1C4O75897 302 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 MT-ND5P03915 603 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 HLA-DPB1P04440 258 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 HIST1H2ABP04908 130 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 SOD3P08294 240 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 OR2T7P0C7T2 308 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 CLUP10909 449 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 CD40P25942 277 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 SDHAP31040 664 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 AQP2P41181 271 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 SELENOPP49908 381 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 CLDN17P56750 224 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 ERVK-25P63136 954 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 FABP5Q01469 135 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 ZNF85Q03923 595 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 HSF2Q03933 536 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 MFSD13AQ14CX5 517 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 TRAM1Q15629 374 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 GPR139Q6DWJ6 353 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 B3GLCTQ6Y288 498 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 HIST3H2AQ7L7L0 130 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 KLBQ86Z14 1044 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 ARIH2OSQ8N7S6 290 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 OR10H4Q8NGA5 316 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 OR2T27Q8NH04 317 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 ZNF417Q8TAU3 575 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 CHPT1Q8WUD6 406 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 IGFBPL1Q8WX77 278 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 HIST1H2ACQ93077 130 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 TAAR8Q969N4 342 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 SLC25A46Q96AG3 418 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 OXGR1Q96P68 337 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 ZNF587Q96SQ5 575 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-214ENST00000554604 CNN2Q99439 309 aaKnown RBP10.85□□□□□ -0.67
SHMT2-214ENST00000554604 C6orf62Q9GZU0 229 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-214ENST00000554604 GSX1Q9H4S2 264 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-214ENST00000554604 TRIM36Q9NQ86 728 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 SLC17A5Q9NRA2 495 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 ZNF701Q9NV72 531 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-214ENST00000554604 B3GALT5Q9Y2C3 310 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 ADAM18Q9Y3Q7 739 aa10.85□□□□□ -0.67
SHMT2-214ENST00000554604 HIVEP2P31629 2446 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 PNMA8CA0A1B0GUJ8 204 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 FAM171A2A8MVW0 826 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 SHISA9B4DS77 424 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 BLOC1S5-TXNDC5H3BN57 136 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 H7C1Q1 480 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 GLCEO94923 617 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 CDRT1O95170 752 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 WNT11O96014 354 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 DANCRP0C864 163 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 PAX1P15863 534 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 SPI1P17947 270 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 CELP19835 753 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 GRPRP30550 384 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 CTXN1P60606 82 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 ACTA2P62736 377 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 ACTG2P63267 376 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 RUNX1T1Q06455 604 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 RPL18Q07020 188 aaKnown RBP10.84□□□□□ -0.67
SHMT2-214ENST00000554604 RGS21Q2M5E4 152 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 C1QTNF12Q5T7M4 302 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 C22orf42Q6IC83 251 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 H1FNTQ75WM6 255 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-214ENST00000554604 JAZF1Q86VZ6 243 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 EGFL6Q8IUX8 553 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 SYS1Q8N2H4 156 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 ZFP41Q8N8Y5 198 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 WDR31Q8NA23 367 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 TMEM203Q969S6 136 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 RASD2Q96D21 266 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 MRPL48Q96GC5 212 aaKnown RBP10.84□□□□□ -0.67
SHMT2-214ENST00000554604 Q96M85 177 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms