RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 TUBAL3A6NHL2 446 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 ANXA2P2A6NMY6 339 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 APOC3P02656 99 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 RAET1LQ5VY80 246 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 PRSS35Q8N3Z0 413 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 LILRB2Q8N423 598 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 OR5AK2Q8NH90 309 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 OTOSQ8NHW6 89 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 ASB10Q8WXI3 467 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 ZNF775Q96BV0 537 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-212ENST00000554467 EDEM2Q9BV94 578 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 SDHAF3Q9NRP4 125 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 SERINC1Q9NRX5 453 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 FBXL3Q9UKT7 428 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 ZNF281Q9Y2X9 895 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 SPENQ96T58 3664 aaKnown RBP10.43□□□□□ -0.74
SHMT2-212ENST00000554467 TRAV20A0A0B4J274 112 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 TRABD2BA6NFA1 517 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 EIF2B1Q14232 305 aaKnown RBP10.42□□□□□ -0.74
SHMT2-212ENST00000554467 EXT1Q16394 746 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 PLA2G2CQ5R387 149 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 LINGO2Q7L985 606 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 LRRC28Q86X40 367 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-212ENST00000554467 ZNF676Q8N7Q3 588 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 RNF138Q8WVD3 245 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 MRGPRX4Q96LA9 322 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 GFI1Q99684 422 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 PROK2Q9HC23 129 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 COPZ2Q9P299 210 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 B3GAT1Q9P2W7 334 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 COL27A1Q8IZC6 1860 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-212ENST00000554467 CUL9Q8IWT3 2517 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 DSPP15924 2871 aaKnown RBP10.42□□□□□ -0.74
SHMT2-212ENST00000554467 FAM25EA8MYX2 175 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 B4E171 279 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 NDUFS6O75380 124 aaKnown RBP10.42□□□□□ -0.74
SHMT2-212ENST00000554467 PNPP00491 289 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 ALDOBP05062 364 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 SRMP19623 302 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 DPP4P27487 766 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 TSPAN7P41732 249 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 SUMO3P55854 103 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-212ENST00000554467 ALKBH1Q13686 389 aaKnown RBP10.42□□□□□ -0.74
SHMT2-212ENST00000554467 STPG1Q5TH74 334 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 Q6ZTK2 550 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 OR2G2Q8NGZ5 317 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 OR1S1Q8NH92 325 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 CACNG6Q9BXT2 260 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 STRADBQ9C0K7 418 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 AUNIPQ9H7T9 357 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 TINAGQ9UJW2 476 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 PCSK5Q92824 1860 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 PLSCR5A0PG75 271 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 ZNF879B4DU55 563 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 AIPO00170 330 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 ADRB1P08588 477 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 TACSTD2P09758 323 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 FOSL1P15407 271 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 GALP22466 123 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 CDAP32320 146 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 TSPAN5P62079 268 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 MFGE8Q08431 387 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-212ENST00000554467 TRAM1Q15629 374 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 ZNF528Q3MIS6 628 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 C3orf33Q6P1S2 294 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 SIAH3Q8IW03 269 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 GAL3ST1Q99999 423 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 ABHD6Q9BV23 337 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 PTGES2Q9H7Z7 377 aa10.42□□□□□ -0.74
SHMT2-212ENST00000554467 VSX1Q9NZR4 365 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-212ENST00000554467 SERPINA3P01011 423 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 MAS1P04201 325 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 UCHL1P09936 223 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 EPXP11678 715 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 KIR3DL2P43630 455 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 MEOX2P50222 304 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 BLVRAP53004 296 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 MFAP5Q13361 173 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 WDR38Q5JTN6 314 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 PDSS1Q5T2R2 415 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 TMEM225Q6GV28 225 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 FAAP20Q6NZ36 180 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 OPN5Q6U736 354 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 MRPL48Q96GC5 212 aaKnown RBP10.41□□□□□ -0.74
SHMT2-212ENST00000554467 CYSLTR2Q9NS75 346 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 SPATA2Q9UM82 520 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 PTPRZ1P23471 2315 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-212ENST00000554467 MAP1BP46821 2468 aaKnown RBP10.41□□□□□ -0.74
SHMT2-212ENST00000554467 A0A1B0GVI7 797 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 ZNF208O43345 1280 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 H2AFB1P0C5Y9 115 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 H2AFB2P0C5Z0 115 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 CD53P19397 219 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 RFC3P40938 356 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 SLC22A10Q63ZE4 541 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 KRT77Q7Z794 578 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 M1APQ8TC57 530 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 BCL2L14Q9BZR8 327 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 SEC61A2Q9H9S3 476 aa10.41□□□□□ -0.74
SHMT2-212ENST00000554467 CENPMQ9NSP4 180 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms