RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 TNFSF4P23510 183 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 IFNGR2P38484 337 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 MAGEA2P43356 314 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 GPR4P46093 362 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 OMPP47874 163 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 RGS6P49758 472 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 TNFAIP6P98066 277 aaPredicted RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 MS4A2Q01362 244 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 KRR1Q13601 381 aaKnown RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 TUSC1Q2TAM9 212 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 TMEM155Q4W5P6 130 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 DCAF12L2Q5VW00 463 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 TBPL2Q6SJ96 375 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 DPY19L2P2Q6ZN68 376 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 VASH1Q7L8A9 365 aaPredicted RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 TSEN54Q7Z6J9 526 aaKnown RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 GLB1L2Q8IW92 636 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 ZNF283Q8N7M2 679 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 PAPD5Q8NDF8 572 aaKnown RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 OR5L1Q8NGL2 311 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 NANPQ8TBE9 248 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 FAM216AQ8WUB2 273 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 CCL17Q92583 94 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 PTP4A1Q93096 173 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 RNF166Q96A37 237 aaPredicted RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 CCDC124Q96CT7 223 aaKnown RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 HAVCR1Q96D42 359 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 DUS3LQ96G46 650 aaKnown RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 DHRS1Q96LJ7 313 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 SAMD8Q96LT4 415 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 DCLRE1CQ96SD1 692 aaKnown RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 GAL3ST1Q99999 423 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 RBM4Q9BWF3 364 aaKnown RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 EMC7Q9NPA0 242 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 NDUFAF4Q9P032 175 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 GMPR2Q9P2T1 348 aaKnown RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 IL19Q9UHD0 177 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 PURGQ9UJV8 347 aaKnown RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 PCDHB10Q9UN67 800 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 POMPQ9Y244 141 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 ADAM18Q9Y3Q7 739 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 NPTNQ9Y639 398 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 LOC105371242A0A075B767 164 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 DHRS12A0PJE2 317 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 TMEM89A2RUT3 159 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 A8MXK9 166 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 H7C1C5 153 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 TRIM77I1YAP6 450 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 IMPA2O14732 288 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 ARPC3O15145 178 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 SCG5P05408 212 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 FCGR1AP12314 374 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 ADRA2CP18825 462 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 CRABP1P29762 137 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 HTR5AP47898 357 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 RPS6KA3P51812 740 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 HMGA2P52926 109 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 FXYD6P3P58550 94 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 LCN6P62502 163 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 HIST1H3AP68431 136 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 ZSCAN26Q16670 478 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 HIST2H3PS2Q5TEC6 136 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 C1orf146Q5VVC0 180 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 SLC27A4Q6P1M0 643 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 ZFP1Q6P2D0 407 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 DNM1P34Q6PK57 102 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 CYP2R1Q6VVX0 501 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 C12orf54Q6X4T0 127 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 FBXW12Q6X9E4 464 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 Q6ZR03 302 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 HIST2H3AQ71DI3 136 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 LRRC28Q86X40 367 aaPredicted RBP5.58□□□□□ -1.52
SLIRP-203ENST00000554074 ZDHHC21Q8IVQ6 265 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 SPICQ8N5J4 248 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 GJC3Q8NFK1 279 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 OR1F12Q8NHA8 337 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 ST7LQ8TDW4 575 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 RASD2Q96D21 266 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 CMBLQ96DG6 245 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 ZMYND19Q96E35 227 aaPredicted RBP5.58□□□□□ -1.52
SLIRP-203ENST00000554074 FAM46AQ96IP4 442 aaKnown RBP5.58□□□□□ -1.52
SLIRP-203ENST00000554074 RSRC1Q96IZ7 334 aaKnown RBP5.58□□□□□ -1.52
SLIRP-203ENST00000554074 CLPTM1LQ96KA5 538 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 COQ7Q99807 217 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 FUZQ9BT04 418 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 SUCNR1Q9BXA5 334 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 OSBPL10Q9BXB5 764 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 HDHD2Q9H0R4 259 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 SYT4Q9H2B2 425 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 MSL2Q9HCI7 577 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 TMEM106BQ9NUM4 274 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 ARMC1Q9NVT9 282 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 PLEK2Q9NYT0 353 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 AURKCQ9UQB9 309 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 STARD10Q9Y365 291 aa5.58□□□□□ -1.52
SLIRP-203ENST00000554074 A0A1B0GWJ7 208 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 ISPDA4D126 451 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 ARRDC5A6NEK1 342 aa5.57□□□□□ -1.52
SLIRP-203ENST00000554074 UNC119BA6NIH7 251 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms