RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 ZNF281Q9Y2X9 895 aa10□□□□□ -0.81
SRP54-203ENST00000553544 WIPI2Q9Y4P8 454 aa10□□□□□ -0.81
SRP54-203ENST00000553544 AQP12BA6NM10 295 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 ARPC3O15145 178 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 SLC16A7O60669 478 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 KHDRBS3O75525 346 aaKnown RBP9.99□□□□□ -0.81
SRP54-203ENST00000553544 DNAJC8O75937 253 aaPredicted RBP9.99□□□□□ -0.81
SRP54-203ENST00000553544 KRT36O76013 467 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 NGFP01138 241 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 MT-ND5P03915 603 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 T-ENOLP0DO92 83 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 FPR3P25089 353 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 RRM2P31350 389 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 MAGEA2P43356 314 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 GSSP48637 474 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 RPS6KA3P51812 740 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 LSM6P62312 80 aaKnown RBP9.99□□□□□ -0.81
SRP54-203ENST00000553544 LCN2P80188 198 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 SPIBQ01892 262 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 ZNF718Q3SXZ3 478 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 MBNL2Q5VZF2 373 aaKnown RBP9.99□□□□□ -0.81
SRP54-203ENST00000553544 C1orf94Q6P1W5 598 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 UNQ6126/PRO20091Q6UXV3 157 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 RFPL4BQ6ZWI9 263 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 ADCK1Q86TW2 530 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 ZDHHC21Q8IVQ6 265 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 AQP12AQ8IXF9 295 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 SLC25A40Q8TBP6 338 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 CCDC124Q96CT7 223 aaKnown RBP9.99□□□□□ -0.81
SRP54-203ENST00000553544 THTPAQ9BU02 230 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 NUAK2Q9H093 628 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 SYT4Q9H2B2 425 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 OR52D1Q9H346 318 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 EIF3KQ9UBQ5 218 aaKnown RBP9.99□□□□□ -0.81
SRP54-203ENST00000553544 KLHL21Q9UJP4 597 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 TMCC3Q9ULS5 477 aa9.99□□□□□ -0.81
SRP54-203ENST00000553544 COA3Q9Y2R0 106 aaPredicted RBP9.99□□□□□ -0.81
SRP54-203ENST00000553544 PPIAL4EA0A075B759 164 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 PPIAL4CA0A0B4J2A2 164 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 TCRBV5S2A0A599 114 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 DNAJC9-AS1A6NH13 148 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 PPIAL4DF5H284 164 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 H3BSA7 217 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 DCTN6O00399 190 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 SOCS2O14508 198 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 OR10H3O60404 316 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 RNASE1P07998 156 aaKnown RBP9.98□□□□□ -0.81
SRP54-203ENST00000553544 PPIAL4FP0DN26 164 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 ATP6V1B2P21281 511 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 MPV17P39210 176 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 MMP15P51511 669 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 SCRN3Q0VDG4 424 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 AQP6Q13520 282 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 KCNMB1Q16558 191 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 TUSC1Q2TAM9 212 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 USP51Q70EK9 711 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 GLB1L2Q8IW92 636 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 ICA1LQ8NDH6 482 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 KLF14Q8TD94 323 aaPredicted RBP9.98□□□□□ -0.81
SRP54-203ENST00000553544 ST7LQ8TDW4 575 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 C4orf45Q96LM5 186 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 GAL3ST1Q99999 423 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 OR2J1Q9GZK6 312 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 TBCCD1Q9NVR7 557 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 PLEK2Q9NYT0 353 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 ZNF69Q9UC07 566 aa9.98□□□□□ -0.81
SRP54-203ENST00000553544 NDRG4Q9ULP0 352 aaKnown RBP9.98□□□□□ -0.81
SRP54-203ENST00000553544 IGLV1-36A0A0B4J1U3 117 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 CLDN34H7C241 214 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 SGCEO43556 437 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 FOXH1O75593 365 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 PPP1R3DO95685 299 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 ADH4P08319 380 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 RAP2AP10114 183 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 GCH1P30793 250 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 SLC6A6P31641 620 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 PPP1CBP62140 327 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 HIST1H3AP68431 136 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 MS4A2Q01362 244 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 SLC3A1Q07837 685 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 BNIP1Q12981 228 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 TSPAN31Q12999 210 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 FLOT2Q14254 428 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 TSTQ16762 297 aaKnown RBP9.97□□□□□ -0.81
SRP54-203ENST00000553544 CCDC92Q53HC0 331 aaPredicted RBP9.97□□□□□ -0.81
SRP54-203ENST00000553544 ARMCX4Q5H9R4 360 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 FAM209AQ5JX71 171 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 SPATA46Q5T0L3 261 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 HIST2H3PS2Q5TEC6 136 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 OTPQ5XKR4 325 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 ZNF770Q6IQ21 691 aaPredicted RBP9.97□□□□□ -0.81
SRP54-203ENST00000553544 PGBD2Q6P3X8 592 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 CYP2R1Q6VVX0 501 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 HIST2H3AQ71DI3 136 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 VASH1Q7L8A9 365 aaPredicted RBP9.97□□□□□ -0.81
SRP54-203ENST00000553544 OR4C15Q8NGM1 316 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 FANK1Q8TC84 345 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 GNPDA2Q8TDQ7 276 aa9.97□□□□□ -0.81
SRP54-203ENST00000553544 IPCEF1Q8WWN9 437 aaPredicted RBP9.97□□□□□ -0.81
SRP54-203ENST00000553544 CCL17Q92583 94 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 1550.8 ms