RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 RGS6P49758 472 aa12.6□□□□□ -0.39
CACNB3-220ENST00000551716 EFNB2P52799 333 aa12.6□□□□□ -0.39
CACNB3-220ENST00000551716 GUCA2AQ02747 115 aa12.6□□□□□ -0.39
CACNB3-220ENST00000551716 STX3Q13277 289 aa12.6□□□□□ -0.39
CACNB3-220ENST00000551716 FOXB2Q5VYV0 432 aa12.6□□□□□ -0.39
CACNB3-220ENST00000551716 FOXL2NBQ6ZUU3 175 aa12.6□□□□□ -0.39
CACNB3-220ENST00000551716 CLDN22Q8N7P3 220 aa12.6□□□□□ -0.39
CACNB3-220ENST00000551716 OR2T6Q8NHC8 308 aa12.6□□□□□ -0.39
CACNB3-220ENST00000551716 DMRTB1Q96MA1 342 aa12.6□□□□□ -0.39
CACNB3-220ENST00000551716 PPA2Q9H2U2 334 aa12.6□□□□□ -0.39
CACNB3-220ENST00000551716 MMADHCQ9H3L0 296 aaPredicted RBP12.6□□□□□ -0.39
CACNB3-220ENST00000551716 WDR55Q9H6Y2 383 aaPredicted RBP12.6□□□□□ -0.39
CACNB3-220ENST00000551716 CNTD2Q9H8S5 307 aa12.6□□□□□ -0.39
CACNB3-220ENST00000551716 TMCC3Q9ULS5 477 aa12.6□□□□□ -0.39
CACNB3-220ENST00000551716 CORO2BQ9UQ03 480 aa12.6□□□□□ -0.39
CACNB3-220ENST00000551716 F5H5P2 479 aa12.59□□□□□ -0.39
CACNB3-220ENST00000551716 HDAC3O15379 428 aa12.59□□□□□ -0.39
CACNB3-220ENST00000551716 SGCEO43556 437 aa12.59□□□□□ -0.39
CACNB3-220ENST00000551716 DOK2O60496 412 aa12.59□□□□□ -0.39
CACNB3-220ENST00000551716 LYPD3O95274 346 aa12.59□□□□□ -0.39
CACNB3-220ENST00000551716 PAHP00439 452 aa12.59□□□□□ -0.39
CACNB3-220ENST00000551716 IGF2P01344 180 aa12.59□□□□□ -0.39
CACNB3-220ENST00000551716 MT-ND1P03886 318 aa12.59□□□□□ -0.39
CACNB3-220ENST00000551716 IFFO1Q0D2I5 559 aa12.59□□□□□ -0.39
CACNB3-220ENST00000551716 DBPQ10586 325 aaPredicted RBP12.59□□□□□ -0.39
CACNB3-220ENST00000551716 ENDOGQ14249 297 aaKnown RBP12.59□□□□□ -0.39
CACNB3-220ENST00000551716 CDONQ4KMG0 1287 aa12.59□□□□□ -0.39
CACNB3-220ENST00000551716 NXNQ6DKJ4 435 aa12.59□□□□□ -0.39
CACNB3-220ENST00000551716 OR2T2Q6IF00 324 aa12.59□□□□□ -0.39
CACNB3-220ENST00000551716 METAP1DQ6UB28 335 aaPredicted RBP12.59□□□□□ -0.39
CACNB3-220ENST00000551716 C11orf44Q8N8P7 122 aa12.59□□□□□ -0.39
CACNB3-220ENST00000551716 OR6T1Q8NGN1 323 aa12.59□□□□□ -0.39
CACNB3-220ENST00000551716 OR4C13Q8NGP0 309 aa12.59□□□□□ -0.39
CACNB3-220ENST00000551716 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.59□□□□□ -0.39
CACNB3-220ENST00000551716 GMEB1Q9Y692 573 aa12.59□□□□□ -0.39
CACNB3-220ENST00000551716 LOC100653049A0A140TA62 436 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 A0A1B0GWJ7 208 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 A0A1W2PPL8 197 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 ELOVL7A1L3X0 281 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 M0R3H8 397 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 ADAM20O43506 726 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 KRT34O76011 436 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 OR7A10O76100 309 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 AQP1P29972 269 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 ERFP50548 548 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 DEFB121Q5J5C9 76 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 C1orf94Q6P1W5 598 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 PDZD9Q8IXQ8 264 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 SMYD1Q8NB12 490 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 LIPHQ8WWY8 451 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 FAM234AQ9H0X4 552 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 CENPHQ9H3R5 247 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 RAB18Q9NP72 206 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 MEPEQ9NQ76 525 aaPredicted RBP12.58□□□□□ -0.4
CACNB3-220ENST00000551716 RNF7Q9UBF6 113 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 FOXJ3Q9UPW0 622 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 ANGPT4Q9Y264 503 aa12.58□□□□□ -0.4
CACNB3-220ENST00000551716 TRAV38-1A0A0B4J264 116 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 IGHV3-64DA0A0J9YX35 117 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 IQCF6A8MYZ5 107 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 EVPLLA8MZ36 301 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 LGALS8O00214 317 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 MLNRO43193 412 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 THY1P04216 161 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 TSPAN19P0C672 248 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 FPR3P25089 353 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 RBM34P42696 430 aaKnown RBP12.57□□□□□ -0.4
CACNB3-220ENST00000551716 DUSP7Q16829 419 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 LRIF1Q5T3J3 769 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 INTS11Q5TA45 600 aaKnown RBP12.57□□□□□ -0.4
CACNB3-220ENST00000551716 SLC2A7Q6PXP3 512 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 BTN2A1Q7KYR7 527 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 VMO1Q7Z5L0 202 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 CMTM4Q8IZR5 234 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 KLHDC1Q8N7A1 406 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 APOBEC3DQ96AK3 386 aaPredicted RBP12.57□□□□□ -0.4
CACNB3-220ENST00000551716 R3HDM4Q96D70 268 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 SGTBQ96EQ0 304 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 RANBP3Q9H6Z4 567 aaPredicted RBP12.57□□□□□ -0.4
CACNB3-220ENST00000551716 POLE4Q9NR33 117 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 COL7A1Q02388 2944 aa12.57□□□□□ -0.4
CACNB3-220ENST00000551716 A6NIZ1 184 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 UBDO15205 165 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 FAM20BO75063 409 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 HOXB9P17482 250 aaPredicted RBP12.56□□□□□ -0.4
CACNB3-220ENST00000551716 GPX2P18283 190 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 CD247P20963 164 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 BGNP21810 368 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 RAP1BP61224 184 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 RPL27P61353 136 aaKnown RBP12.56□□□□□ -0.4
CACNB3-220ENST00000551716 RAP1AP62834 184 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 CD69Q07108 199 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 LAPTM4AQ15012 233 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 NSUN5P1Q3KNT7 163 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 ALG10Q5BKT4 473 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 C1orf122Q6ZSJ8 110 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 CALHM3Q86XJ0 350 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 NDUFA11Q86Y39 141 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 WFDC9Q8NEX5 89 aa12.56□□□□□ -0.4
CACNB3-220ENST00000551716 MOSPD2Q8NHP6 518 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms