RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 SYT4Q9H2B2 425 aa17.33■□□□□ 0.36
CACNB3-218ENST00000550771 NRIP3Q9NQ35 241 aa17.33■□□□□ 0.36
CACNB3-218ENST00000550771 FGFR1OP2Q9NVK5 253 aa17.33■□□□□ 0.36
CACNB3-218ENST00000550771 VSX1Q9NZR4 365 aaPredicted RBP17.33■□□□□ 0.36
CACNB3-218ENST00000550771 COA3Q9Y2R0 106 aaPredicted RBP17.33■□□□□ 0.36
CACNB3-218ENST00000550771 PTP4A3O75365 173 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 NDUFB2O95178 105 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 MTNR1AP48039 350 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 LIPEQ05469 1076 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 KCNMB1Q16558 191 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 BTNL3Q6UXE8 466 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 LRRN1Q6UXK5 716 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 FKBP9P1Q75LS8 142 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 ADCK1Q86TW2 530 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 CYP4Z1Q86W10 505 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 OR5AS1Q8N127 324 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 OR52E2Q8NGJ4 325 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 SLC7A13Q8TCU3 470 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 APOBEC3DQ96AK3 386 aaPredicted RBP17.32■□□□□ 0.36
CACNB3-218ENST00000550771 RCN3Q96D15 328 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 TMEM165Q9HC07 324 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 GMPR2Q9P2T1 348 aaKnown RBP17.32■□□□□ 0.36
CACNB3-218ENST00000550771 MIOXQ9UGB7 285 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 SIGLEC7Q9Y286 467 aa17.32■□□□□ 0.36
CACNB3-218ENST00000550771 POM121CA8CG34 1229 aa17.31■□□□□ 0.36
CACNB3-218ENST00000550771 RER1O15258 196 aa17.31■□□□□ 0.36
CACNB3-218ENST00000550771 KCNAB3O43448 404 aa17.31■□□□□ 0.36
CACNB3-218ENST00000550771 DBHP09172 617 aa17.31■□□□□ 0.36
CACNB3-218ENST00000550771 RPS2P15880 293 aaKnown RBP17.31■□□□□ 0.36
CACNB3-218ENST00000550771 SRP9P49458 86 aaKnown RBP17.31■□□□□ 0.36
CACNB3-218ENST00000550771 IL13RA1P78552 427 aa17.31■□□□□ 0.36
CACNB3-218ENST00000550771 HLXQ14774 488 aaPredicted RBP17.31■□□□□ 0.36
CACNB3-218ENST00000550771 ZNF181Q2M3W8 571 aa17.31■□□□□ 0.36
CACNB3-218ENST00000550771 OTPQ5XKR4 325 aa17.31■□□□□ 0.36
CACNB3-218ENST00000550771 OR2T2Q6IF00 324 aa17.31■□□□□ 0.36
CACNB3-218ENST00000550771 CGB2Q6NT52 195 aa17.31■□□□□ 0.36
CACNB3-218ENST00000550771 PARP8Q8N3A8 854 aa17.31■□□□□ 0.36
CACNB3-218ENST00000550771 RP9Q8TA86 221 aaKnown RBP17.31■□□□□ 0.36
CACNB3-218ENST00000550771 UPRTQ96BW1 309 aa17.31■□□□□ 0.36
CACNB3-218ENST00000550771 FAM46AQ96IP4 442 aaKnown RBP17.31■□□□□ 0.36
CACNB3-218ENST00000550771 HSH2DQ96JZ2 352 aa17.31■□□□□ 0.36
CACNB3-218ENST00000550771 ZNF582Q96NG8 517 aaPredicted RBP17.31■□□□□ 0.36
CACNB3-218ENST00000550771 UNKLQ9H9P5 680 aaKnown RBP17.31■□□□□ 0.36
CACNB3-218ENST00000550771 ENPP4Q9Y6X5 453 aa17.31■□□□□ 0.36
CACNB3-218ENST00000550771 A0A1W2PRQ8 180 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 GSTA4O15217 222 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 SERPINA1P01009 418 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 SF3A3Q12874 501 aaKnown RBP eCLIP17.3■□□□□ 0.36
CACNB3-218ENST00000550771 DGCR6Q14129 220 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 SLC9A3R2Q15599 337 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 LEG1Q6P5S2 330 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 PGM2L1Q6PCE3 622 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 TSEN54Q7Z6J9 526 aaKnown RBP17.3■□□□□ 0.36
CACNB3-218ENST00000550771 KLBQ86Z14 1044 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 GJC3Q8NFK1 279 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 OR10AD1Q8NGE0 317 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 ZNF420Q8TAQ5 688 aaPredicted RBP17.3■□□□□ 0.36
CACNB3-218ENST00000550771 RAB40AQ8WXH6 277 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 DACT3Q96B18 629 aaPredicted RBP17.3■□□□□ 0.36
CACNB3-218ENST00000550771 PLEKHA8Q96JA3 519 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 COQ7Q99807 217 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 HOPXQ9BPY8 73 aaPredicted RBP17.3■□□□□ 0.36
CACNB3-218ENST00000550771 SLC30A2Q9BRI3 323 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 NUAK2Q9H093 628 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 HDHD2Q9H0R4 259 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 RERGLQ9H628 205 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 ARGLU1Q9NWB6 273 aaPredicted RBP17.3■□□□□ 0.36
CACNB3-218ENST00000550771 PTTG3PQ9NZH4 202 aa17.3■□□□□ 0.36
CACNB3-218ENST00000550771 IGHV2-70DA0A0C4DH43 119 aa17.29■□□□□ 0.36
CACNB3-218ENST00000550771 LRRC30A6NM36 301 aa17.29■□□□□ 0.36
CACNB3-218ENST00000550771 IQCF6A8MYZ5 107 aa17.29■□□□□ 0.36
CACNB3-218ENST00000550771 CYB5R3P00387 301 aaPredicted RBP17.29■□□□□ 0.36
CACNB3-218ENST00000550771 PLATP00750 562 aa17.29■□□□□ 0.36
CACNB3-218ENST00000550771 H1F0P07305 194 aaKnown RBP17.29■□□□□ 0.36
CACNB3-218ENST00000550771 IGHV4-38-2P0DP08 117 aa17.29■□□□□ 0.36
CACNB3-218ENST00000550771 GNB2P62879 340 aa17.29■□□□□ 0.36
CACNB3-218ENST00000550771 HIST1H3AP68431 136 aa17.29■□□□□ 0.36
CACNB3-218ENST00000550771 HIST2H3PS2Q5TEC6 136 aa17.29■□□□□ 0.36
CACNB3-218ENST00000550771 DPY19L2P2Q6ZN68 376 aa17.29■□□□□ 0.36
CACNB3-218ENST00000550771 HIST2H3AQ71DI3 136 aa17.29■□□□□ 0.36
CACNB3-218ENST00000550771 POU5F2Q8N7G0 328 aa17.29■□□□□ 0.36
CACNB3-218ENST00000550771 NEIL1Q96FI4 390 aaPredicted RBP17.29■□□□□ 0.36
CACNB3-218ENST00000550771 ARMCX1Q9P291 453 aa17.29■□□□□ 0.36
CACNB3-218ENST00000550771 POLR1DQ9Y2S0 133 aa17.29■□□□□ 0.36
CACNB3-218ENST00000550771 A0A1B0GWJ7 208 aa17.28■□□□□ 0.36
CACNB3-218ENST00000550771 NME4O00746 187 aa17.28■□□□□ 0.36
CACNB3-218ENST00000550771 SOCS2O14508 198 aa17.28■□□□□ 0.36
CACNB3-218ENST00000550771 IMPA2O14732 288 aa17.28■□□□□ 0.36
CACNB3-218ENST00000550771 ZNF205O95201 554 aa17.28■□□□□ 0.36
CACNB3-218ENST00000550771 TXNDC12O95881 172 aa17.28■□□□□ 0.36
CACNB3-218ENST00000550771 CRABP1P29762 137 aa17.28■□□□□ 0.36
CACNB3-218ENST00000550771 OMPP47874 163 aa17.28■□□□□ 0.36
CACNB3-218ENST00000550771 SLC7A2P52569 658 aa17.28■□□□□ 0.36
CACNB3-218ENST00000550771 ZNF404Q494X3 552 aa17.28■□□□□ 0.36
CACNB3-218ENST00000550771 DNM1P34Q6PK57 102 aa17.28■□□□□ 0.36
CACNB3-218ENST00000550771 PTCHD4Q6ZW05 846 aa17.28■□□□□ 0.36
CACNB3-218ENST00000550771 NLRC3Q7RTR2 1065 aa17.28■□□□□ 0.36
CACNB3-218ENST00000550771 C1orf87Q8N0U7 546 aa17.28■□□□□ 0.36
CACNB3-218ENST00000550771 TMEM246Q9BRR3 403 aa17.28■□□□□ 0.36
CACNB3-218ENST00000550771 SLITRK2Q9H156 845 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms