RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 TLX3O43711 291 aaPredicted RBP18.52■□□□□ 0.56
PRDM4-205ENST00000550376 MT-ND4P03905 459 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 HSD11B1P28845 292 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 MMP15P51511 669 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 TATDN3Q17R31 274 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 VASH2Q86V25 355 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 SULF2Q8IWU5 870 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 DMRTB1Q96MA1 342 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 NAA11Q9BSU3 229 aaPredicted RBP18.52■□□□□ 0.56
PRDM4-205ENST00000550376 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.52■□□□□ 0.56
PRDM4-205ENST00000550376 SLC5A6Q9Y289 635 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 CACNG2Q9Y698 323 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 MUC6Q6W4X9 2439 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 TRAV6A0A075B6T7 132 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 E9PLN8 166 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 POU3F2P20265 443 aaPredicted RBP18.52■□□□□ 0.56
PRDM4-205ENST00000550376 CSRP1P21291 193 aaKnown RBP18.52■□□□□ 0.56
PRDM4-205ENST00000550376 BTCP35070 178 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 PTH2RP49190 550 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 CCR6P51684 374 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 ART1P52961 327 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 C2orf76Q3KRA6 126 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 TMEM69Q5SWH9 247 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 GLYATL3Q5SZD4 288 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 OR10K2Q6IF99 312 aa18.52■□□□□ 0.56
PRDM4-205ENST00000550376 S100A16Q96FQ6 103 aaKnown RBP18.52■□□□□ 0.56
PRDM4-205ENST00000550376 UTP23Q9BRU9 249 aaKnown RBP18.52■□□□□ 0.56
PRDM4-205ENST00000550376 ORC5O43913 435 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 KDM4BO94953 1096 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 CD2P06729 351 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 FTH1P19P0C7X4 201 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 GNALP38405 381 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 POU3F4P49335 361 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 MMP16P51512 607 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 RNF144BQ7Z419 303 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 COMMD2Q86X83 199 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 TMEM123Q8N131 208 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 OR2M7Q8NG81 312 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 PNRC2Q9NPJ4 139 aaKnown RBP18.51■□□□□ 0.55
PRDM4-205ENST00000550376 PTPRZ1P23471 2315 aaPredicted RBP18.51■□□□□ 0.55
PRDM4-205ENST00000550376 OR5H15A6NDH6 313 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 NR4A2P43354 598 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 RAC3P60763 192 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 ZNF544Q6NX49 715 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 PIP4P1Q86T03 277 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 JAGN1Q8N5M9 183 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 ABHD3Q8WU67 409 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 ADAT3Q96EY9 351 aaPredicted RBP18.51■□□□□ 0.55
PRDM4-205ENST00000550376 AKAP13Q12802 2813 aa18.51■□□□□ 0.55
PRDM4-205ENST00000550376 ATP6V1G1O75348 118 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 IGHV3-9P01782 118 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 GDNFP39905 211 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 MAGEA5P43359 124 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 ZNF121P58317 390 aaPredicted RBP18.5■□□□□ 0.55
PRDM4-205ENST00000550376 CSRP2Q16527 193 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 FAAP20Q6NZ36 180 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 DEGS2Q6QHC5 323 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 DUSP18Q8NEJ0 188 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 CHAC2Q8WUX2 184 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 MGAQ8IWI9 3026 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 ARGFXA6NJG6 315 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 ITGB2P05107 769 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 PATE4P0C8F1 98 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 CALCBP10092 127 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 GIFP27352 417 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 PITPNAQ00169 270 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 FAM3DQ96BQ1 224 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 SPACA5Q96QH8 159 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 CKLFQ9UBR5 152 aa18.5■□□□□ 0.55
PRDM4-205ENST00000550376 ZNF878C9JN71 531 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 F5H5K5 113 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 SYT7O43581 403 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 SLC6A1P30531 599 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 TBRG1Q3YBR2 411 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 TMEM255AQ5JRV8 349 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 FAM57BQ71RH2 274 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 HAVCR1Q96D42 359 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 ALKBH3Q96Q83 286 aaPredicted RBP18.49■□□□□ 0.55
PRDM4-205ENST00000550376 ALG5Q9Y673 324 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 CEP250Q9BV73 2442 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 MEIS3P1A6NDR6 274 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 ABOP16442 354 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 ZNF704Q6ZNC4 412 aaPredicted RBP18.49■□□□□ 0.55
PRDM4-205ENST00000550376 HDDC2Q7Z4H3 204 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 GALNTL5Q7Z4T8 443 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 ELMOD2Q8IZ81 293 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 OR6F1Q8NGZ6 308 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 TMEM54Q969K7 222 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 ULBP2Q9BZM5 246 aa18.49■□□□□ 0.55
PRDM4-205ENST00000550376 GJE1A6NN92 205 aa18.48■□□□□ 0.55
PRDM4-205ENST00000550376 VAMP5O95183 116 aa18.48■□□□□ 0.55
PRDM4-205ENST00000550376 DBHP09172 617 aa18.48■□□□□ 0.55
PRDM4-205ENST00000550376 IGFBP3P17936 291 aaPredicted RBP18.48■□□□□ 0.55
PRDM4-205ENST00000550376 GUCA1AP43080 201 aaPredicted RBP18.48■□□□□ 0.55
PRDM4-205ENST00000550376 GFRA1P56159 465 aa18.48■□□□□ 0.55
PRDM4-205ENST00000550376 RAB11BQ15907 218 aa18.48■□□□□ 0.55
PRDM4-205ENST00000550376 SFRP4Q6FHJ7 346 aaPredicted RBP18.48■□□□□ 0.55
PRDM4-205ENST00000550376 DTX1Q86Y01 620 aa18.48■□□□□ 0.55
PRDM4-205ENST00000550376 CLEC1AQ8NC01 280 aa18.48■□□□□ 0.55
PRDM4-205ENST00000550376 OR1J2Q8NGS2 313 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms