RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 SETD9Q8NE22 299 aa11.53□□□□□ -0.56
NUP188-211ENST00000550219 IL17RDQ8NFM7 739 aa11.53□□□□□ -0.56
NUP188-211ENST00000550219 UBASH3BQ8TF42 649 aa11.53□□□□□ -0.56
NUP188-211ENST00000550219 MRPL24Q96A35 216 aaKnown RBP11.53□□□□□ -0.56
NUP188-211ENST00000550219 PLEKHA8Q96JA3 519 aa11.53□□□□□ -0.56
NUP188-211ENST00000550219 IL4I1Q96RQ9 567 aa11.53□□□□□ -0.56
NUP188-211ENST00000550219 C19orf24Q9BVV8 132 aa11.53□□□□□ -0.56
NUP188-211ENST00000550219 HCAR1Q9BXC0 346 aa11.53□□□□□ -0.56
NUP188-211ENST00000550219 NUAK2Q9H093 628 aa11.53□□□□□ -0.56
NUP188-211ENST00000550219 RACGAP1Q9H0H5 632 aa11.53□□□□□ -0.56
NUP188-211ENST00000550219 NARFLQ9H6Q4 476 aa11.53□□□□□ -0.56
NUP188-211ENST00000550219 IMPAD1Q9NX62 359 aa11.53□□□□□ -0.56
NUP188-211ENST00000550219 B9D1Q9UPM9 204 aa11.53□□□□□ -0.56
NUP188-211ENST00000550219 YLPM1P49750 1951 aaKnown RBP11.52□□□□□ -0.56
NUP188-211ENST00000550219 A0A1W2PPW3 197 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 FAM183AA6NL82 134 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 PRR23D1E9PI22 279 aaPredicted RBP11.52□□□□□ -0.57
NUP188-211ENST00000550219 DCTN6O00399 190 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 DHHO43323 396 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 DENRO43583 198 aaKnown RBP11.52□□□□□ -0.57
NUP188-211ENST00000550219 UBL3O95164 117 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 PATE4P0C8F1 98 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 PRR23D2P0DMB1 279 aaPredicted RBP11.52□□□□□ -0.57
NUP188-211ENST00000550219 CTLA4P16410 223 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 ZNF14P17017 642 aaPredicted RBP11.52□□□□□ -0.57
NUP188-211ENST00000550219 SPI1P17947 270 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 PAICSP22234 425 aaKnown RBP11.52□□□□□ -0.57
NUP188-211ENST00000550219 SLC2A5P22732 501 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 NR4A1P22736 598 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 GIFP27352 417 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 CRABP1P29762 137 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 ALDH3B1P43353 468 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 TEKQ02763 1124 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 FMODQ06828 376 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 CD47Q08722 323 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 RAB39AQ14964 217 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 OCLNQ16625 522 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 NXNL2Q5VZ03 156 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 PLBD1Q6P4A8 553 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 FOXL2NBQ6ZUU3 175 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 THAP5Q7Z6K1 395 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 C8orf59Q8N0T1 100 aaPredicted RBP11.52□□□□□ -0.57
NUP188-211ENST00000550219 TSSK2Q96PF2 358 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 RPRD1BQ9NQG5 326 aaKnown RBP11.52□□□□□ -0.57
NUP188-211ENST00000550219 B3GNT2Q9NY97 397 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 ZNF224Q9NZL3 707 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 SPEF1Q9Y4P9 236 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 UGT2A1Q9Y4X1 527 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 COL6A5A8TX70 2615 aa11.52□□□□□ -0.57
NUP188-211ENST00000550219 PRODHO43272 600 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 SYNGR3O43761 229 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 SLC16A7O60669 478 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 LILRA1O75019 489 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 KHDRBS3O75525 346 aaKnown RBP11.51□□□□□ -0.57
NUP188-211ENST00000550219 WBP4O75554 376 aaKnown RBP11.51□□□□□ -0.57
NUP188-211ENST00000550219 CLUP10909 449 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 SRP14P37108 136 aaKnown RBP11.51□□□□□ -0.57
NUP188-211ENST00000550219 RPS23P62266 143 aaKnown RBP11.51□□□□□ -0.57
NUP188-211ENST00000550219 RAB1AP62820 205 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 ALKBH6Q3KRA9 238 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 SLC35D3Q5M8T2 416 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 LINC01590Q5TEZ4 76 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 MEDAGQ5VYS4 303 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 DNM1P34Q6PK57 102 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 ZNF627Q7L945 461 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 BCDIN3DQ7Z5W3 292 aaKnown RBP11.51□□□□□ -0.57
NUP188-211ENST00000550219 LRP11Q86VZ4 500 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 ZNF786Q8N393 782 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 BBS1Q8NFJ9 593 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 OR9Q1Q8NGQ5 310 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 OR2T4Q8NH00 348 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 APH1BQ8WW43 257 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 ZNRF4Q8WWF5 429 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 ZNF582Q96NG8 517 aaPredicted RBP11.51□□□□□ -0.57
NUP188-211ENST00000550219 OR51B6Q9H340 312 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 Q9H521 79 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 MED20Q9H944 212 aa11.51□□□□□ -0.57
NUP188-211ENST00000550219 SRA1Q9HD15 236 aaKnown RBP11.51□□□□□ -0.57
NUP188-211ENST00000550219 MYEF2Q9P2K5 600 aaKnown RBP11.51□□□□□ -0.57
NUP188-211ENST00000550219 CCDC182A6NF36 153 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 TACSTD2P09758 323 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 FAM157BP0CG42 384 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 ZNF35P13682 527 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 CENPAP49450 140 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 IL5RAQ01344 420 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 DBPQ10586 325 aaPredicted RBP11.5□□□□□ -0.57
NUP188-211ENST00000550219 CDK5R2Q13319 367 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 NRN1LQ496H8 165 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 LAIR2Q6ISS4 152 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 GID4Q8IVV7 300 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 SKA3Q8IX90 412 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 LINC01356Q8N9X3 169 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 FGFBP3Q8TAT2 258 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 ZNF75AQ96N20 296 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 RNF121Q9H920 327 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 HAO2Q9NYQ3 351 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 AASSQ9UDR5 926 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 DUSP13Q9UII6 198 aa11.5□□□□□ -0.57
NUP188-211ENST00000550219 COA3Q9Y2R0 106 aaPredicted RBP11.5□□□□□ -0.57
NUP188-211ENST00000550219 MXRA5Q9NR99 2828 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms