RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 ANP32AP39687 249 aaKnown RBP2.02□□□□□ -2.09
CCDC38-208ENST00000549876 CSKP41240 450 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 RORCP51449 518 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 CCR8P51685 355 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 UBE2MP61081 183 aaKnown RBP2.02□□□□□ -2.09
CCDC38-208ENST00000549876 RPS15AP62244 130 aaKnown RBP2.02□□□□□ -2.09
CCDC38-208ENST00000549876 SLC25A11Q02978 314 aaKnown RBP2.02□□□□□ -2.09
CCDC38-208ENST00000549876 TWF1Q12792 350 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 RCAN2Q14206 197 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 PSMD5Q16401 504 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 NRF1Q16656 503 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 TRMT5Q32P41 509 aaKnown RBP2.02□□□□□ -2.09
CCDC38-208ENST00000549876 Q5W150 140 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 CNIH2Q6PI25 160 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 ASCL4Q6XD76 172 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 MBOAT1Q6ZNC8 495 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 SLC35D2Q76EJ3 337 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 TMEM150AQ86TG1 271 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 ST13P4Q8IZP2 240 aaPredicted RBP2.02□□□□□ -2.09
CCDC38-208ENST00000549876 ZNF615Q8N8J6 731 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 OR4A15Q8NGL6 344 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 OR1N2Q8NGR9 330 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 OR2A1Q8NGT9 310 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 NUBPLQ8TB37 319 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 NDNFQ8TB73 568 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 LRRC20Q8TCA0 184 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 ISOC2Q96AB3 205 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 ECHDC3Q96DC8 303 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 DNAJC1Q96KC8 554 aaKnown RBP2.02□□□□□ -2.09
CCDC38-208ENST00000549876 FCRL1Q96LA6 429 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 KRTAP4-1Q9BYQ7 146 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 DEFB127Q9H1M4 99 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 SRMSQ9H3Y6 488 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 ZMAT5Q9UDW3 170 aaKnown RBP2.02□□□□□ -2.09
CCDC38-208ENST00000549876 DDX19BQ9UMR2 479 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 FLVCR2Q9UPI3 526 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 YARS2Q9Y2Z4 477 aaKnown RBP2.02□□□□□ -2.09
CCDC38-208ENST00000549876 SLC25A15Q9Y619 301 aa2.02□□□□□ -2.09
CCDC38-208ENST00000549876 MAPK8IP3Q9UPT6 1336 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 IGKV1D-13A0A0B4J2D9 117 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 A0A0G2JLM5 398 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 A0A1W2PRF3 423 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 A0A1W2PRM7 423 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 A6NDN8 102 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 F6UB75 175 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 SMKR1H3BMG3 65 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 SLC9A3R1O14745 358 aaPredicted RBP2.01□□□□□ -2.09
CCDC38-208ENST00000549876 FKBP6O75344 327 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 ETHE1O95571 254 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 C6orf47O95873 294 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 KRT16P08779 473 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 GKN3PP0CG01 181 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 IGKV1-13P0DP09 117 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 FOLR1P15328 257 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 HPGDP15428 266 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 CCNOP22674 350 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 RFC3P40938 356 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 GPR4P46093 362 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 PSMC5P62195 406 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 AQP6Q13520 282 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 OR7A5Q15622 319 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 HSP90B2PQ58FF3 399 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 TPRG1LQ5T0D9 272 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 UBE2UQ5VVX9 321 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 SPECC1LQ69YQ0 1117 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 PRMT9Q6P2P2 845 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 IQCF2Q8IXL9 164 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 ARHGAP18Q8N392 663 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 TCAIMQ8N3R3 496 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 TRAM1L1Q8N609 369 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 FAM86B1Q8N7N1 296 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 ZNF709Q8N972 641 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 OR10G2Q8NGC3 310 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 OR10G9Q8NGN4 311 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 OR6X1Q8NH79 312 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 ITFG1Q8TB96 612 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 SDR42E1Q8WUS8 393 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 ASZ1Q8WWH4 475 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 ARPC1AQ92747 370 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 FAM131CQ96AQ9 280 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 APH1AQ96BI3 265 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 SERPINB12Q96P63 405 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 OR5B12Q96R08 314 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 P2RX4Q99571 388 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 SPIN2AQ99865 258 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 SPIN2BQ9BPZ2 258 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 HDHD3Q9BSH5 251 aaPredicted RBP2.01□□□□□ -2.09
CCDC38-208ENST00000549876 TMEM38AQ9H6F2 299 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 KIR3DX1Q9H7L2 352 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 BEX1Q9HBH7 125 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 CSNK1G1Q9HCP0 422 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 DMAP1Q9NPF5 467 aaPredicted RBP2.01□□□□□ -2.09
CCDC38-208ENST00000549876 ACP6Q9NPH0 428 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 LHX9Q9NQ69 397 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 CTPS2Q9NRF8 586 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 AGPAT4Q9NRZ5 378 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 NUFIP1Q9UHK0 495 aaKnown RBP2.01□□□□□ -2.09
CCDC38-208ENST00000549876 OPN4Q9UHM6 478 aa2.01□□□□□ -2.09
CCDC38-208ENST00000549876 KPTNQ9Y664 436 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms