RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 KIR3DL2P43630 455 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 TGM4P49221 684 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 GBX2P52951 348 aaPredicted RBP7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 TMBIM6P55061 237 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 TAS2R43P59537 309 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 MFGE8Q08431 387 aaPredicted RBP7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 SF3B4Q15427 424 aaKnown RBP eCLIP7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 HSPB2Q16082 182 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 FBXW9Q5XUX1 488 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 OR7E24Q6IFN5 339 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 ARL9Q6T311 187 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF813Q6ZN06 617 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 FAM220AQ7Z4H9 259 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 KCTD20Q7Z5Y7 419 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 KRT77Q7Z794 578 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 P2RY8Q86VZ1 359 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 SKA3Q8IX90 412 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 UBE2J2Q8N2K1 259 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 SLC22A24Q8N4F4 322 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 CNEP1R1Q8N9A8 125 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF420Q8TAQ5 688 aaPredicted RBP7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 UFD1Q92890 307 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 DGCR14Q96DF8 476 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 STARD4Q96DR4 205 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 MRPL48Q96GC5 212 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 CDADC1Q9BWV3 514 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 RNF167Q9H6Y7 350 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 SIAEQ9HAT2 523 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 NOX3Q9HBY0 568 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 TRIM36Q9NQ86 728 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 PLSCR4Q9NRQ2 329 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 RSL24D1Q9UHA3 163 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 PCNX1Q96RV3 2341 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 TLN1Q9Y490 2541 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 POLEQ07864 2286 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 A0A096LPE4 126 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 A0A0G2JNJ9 132 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 A0A1W2PPZ6 126 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 CCDC160A6NGH7 325 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 TRIM64BA6NI03 449 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 PYCARD-AS1I3L0S3 204 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF701M0R085 212 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 DVL2O14641 736 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 TMCC2O75069 709 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 CRHP06850 196 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF32P17041 273 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 COX5AP20674 150 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 GABRA5P31644 462 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 GUCA1AP43080 201 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 CAPZA2P47755 286 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 GDI2P50395 445 aaKnown RBP7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 RIDAP52758 137 aaKnown RBP7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 PER3P56645 1201 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 VBP1P61758 197 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 NCS1P62166 190 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 LSM3P62310 102 aaKnown RBP7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 FABP5Q01469 135 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 SLC3A1Q07837 685 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 GPR50Q13585 617 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 ALKBH1Q13686 389 aaKnown RBP7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 INSL4Q14641 139 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 RSPO1Q2MKA7 263 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 CNPY1Q3B7I2 92 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 NRN1LQ496H8 165 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 WDR38Q5JTN6 314 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 FDX2Q6P4F2 183 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 KCTD18Q6PI47 426 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 CD200R1LQ6Q8B3 271 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 DEGS2Q6QHC5 323 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 Q6ZT83 130 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 ABHD12BQ7Z5M8 362 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 EGFL6Q8IUX8 553 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 GABRG1Q8N1C3 465 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 PRSS35Q8N3Z0 413 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF433Q8N7K0 673 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF610Q8N9Z0 462 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 ST6GALNAC3Q8NDV1 305 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 IL17RDQ8NFM7 739 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 OR1K1Q8NGR3 316 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 OR13C5Q8NGS8 318 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 OR2AJ1Q8NGZ0 328 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 OR2G2Q8NGZ5 317 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 RAB2BQ8WUD1 216 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 RGP1Q92546 391 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 BCL2L2Q92843 193 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 TMEM203Q969S6 136 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 PPP1R14AQ96A00 147 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 SMIM19Q96E16 107 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 C4orf45Q96LM5 186 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 ZFP3Q96NJ6 502 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 DMRTA2Q96SC8 542 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 PDCD1LG2Q9BQ51 273 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 CHCHD6Q9BRQ6 235 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 CENPOQ9BU64 300 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 WNT5BQ9H1J7 359 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 OPN3Q9H1Y3 402 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 G6PC2Q9NQR9 355 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 CENPMQ9NSP4 180 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 DDX28Q9NUL7 540 aaKnown RBP7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 FRRS1LQ9P0K9 344 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms