RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 ZNF576Q9H609 170 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 IGKV1D-42A0A075B6H8 117 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 RER1O15258 196 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 RPS11P62280 158 aaKnown RBP eCLIP12.74□□□□□ -0.37
CACNB3-209ENST00000548860 FOXF1Q12946 379 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 CCINQ13939 588 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 TUSC1Q2TAM9 212 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 C20orf196Q8IYI0 205 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 PNLDC1Q8NA58 520 aaKnown RBP12.74□□□□□ -0.37
CACNB3-209ENST00000548860 GABRG3Q99928 467 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 H3BUI4 141 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 OR2T1O43869 369 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 OR2J2O76002 312 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 RRASP10301 218 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 DPP4P27487 766 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 OPRM1P35372 400 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 TRILQ7L0X0 811 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 MRGPREQ86SM8 312 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 ZNF160Q9HCG1 818 aa12.74□□□□□ -0.37
CACNB3-209ENST00000548860 FANCMQ8IYD8 2048 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 ARPC3O15145 178 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 SCRG1O75711 98 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 PATE4P0C8F1 98 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 RAB3AP20336 220 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 NME2P22392 152 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 SLC6A8P48029 635 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 ATG4DQ86TL0 474 aaPredicted RBP12.73□□□□□ -0.37
CACNB3-209ENST00000548860 PRSS35Q8N3Z0 413 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 FAM181AQ8N9Y4 354 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 PHB2Q99623 299 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 DUSP15Q9H1R2 295 aaPredicted RBP12.73□□□□□ -0.37
CACNB3-209ENST00000548860 C8orf33Q9H7E9 229 aaPredicted RBP12.73□□□□□ -0.37
CACNB3-209ENST00000548860 EHFQ9NZC4 300 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 MBD2Q9UBB5 411 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 M0R036 132 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 XRCC3O43542 346 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 TLX3O43711 291 aaPredicted RBP12.73□□□□□ -0.37
CACNB3-209ENST00000548860 NDUFB6O95139 128 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 SMIM10L1P0DMW3 83 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 BDKRB2P30411 391 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 ATP1B3P54709 279 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 PLAURQ03405 335 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 OR5H2Q8NGV7 314 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 SMIM10Q96HG1 83 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 HS3ST3A1Q9Y663 406 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 DIDO1Q9BTC0 2240 aaKnown RBP12.73□□□□□ -0.37
CACNB3-209ENST00000548860 A0A1B0GUH1 482 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 MCRIP1C9JLW8 97 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 NPIPA2E9PIF3 369 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 NPIPA3F8WFD2 350 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 GDF9O60383 454 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 OTX2P32243 289 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 ACSM1Q08AH1 577 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 SMCO1Q147U7 214 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 EBPQ15125 230 aaKnown RBP12.73□□□□□ -0.37
CACNB3-209ENST00000548860 MEX3BQ6ZN04 569 aaKnown RBP12.73□□□□□ -0.37
CACNB3-209ENST00000548860 SLAMF6Q96DU3 332 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 ZNF764Q96H86 408 aaPredicted RBP12.73□□□□□ -0.37
CACNB3-209ENST00000548860 RADILQ96JH8 1075 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 OR8B4Q96RC9 309 aa12.73□□□□□ -0.37
CACNB3-209ENST00000548860 TEX51A0A1B0GUA7 166 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 F12P00748 615 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-209ENST00000548860 BLVRBP30043 206 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-209ENST00000548860 KIR3DL2P43630 455 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 LIMK1P53667 647 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 H2BFSP57053 126 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 HSF1Q00613 529 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 ELAVL1Q15717 326 aaKnown RBP12.72□□□□□ -0.37
CACNB3-209ENST00000548860 ABCA11PQ4W5N1 156 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 OR5D14Q8NGL3 314 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 LIN37Q96GY3 246 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-209ENST00000548860 PRRG4Q9BZD6 226 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 WWTR1Q9GZV5 400 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 CLEC1BQ9P126 229 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 ANGPTL7O43827 346 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 LCATP04180 440 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 SERPINA5P05154 406 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 SLC37A1P57057 533 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 EGR4Q05215 589 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 FZD5Q13467 585 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 PXKQ7Z7A4 578 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 LSMEM1Q8N8F7 131 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 STK35Q8TDR2 534 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 C2CD4CQ8TF44 421 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 TMPRSS13Q9BYE2 586 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 GPR84Q9NQS5 396 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 MRPS28Q9Y2Q9 187 aaKnown RBP12.72□□□□□ -0.37
CACNB3-209ENST00000548860 C7orf66A4D0T2 115 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 B8ZZF3 427 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 H3BMH7 237 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 ADAP1O75689 374 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 UBE2IP63279 158 aaKnown RBP12.72□□□□□ -0.37
CACNB3-209ENST00000548860 LINC01590Q5TEZ4 76 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 EID2Q8N6I1 236 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 SLC26A10Q8NG04 563 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 C11orf40Q8WZ69 217 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 PELOQ9BRX2 385 aaKnown RBP12.72□□□□□ -0.37
CACNB3-209ENST00000548860 POLE3Q9NRF9 147 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 RARRES3Q9UL19 164 aa12.72□□□□□ -0.37
CACNB3-209ENST00000548860 PCDHGA1Q9Y5H4 931 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms