RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 PDP1Q9P0J1 537 aaPredicted RBP13.56□□□□□ -0.24
DDX54-204ENST00000546898 DNAJB9Q9UBS3 223 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 CYB5R1Q9UHQ9 305 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 GRIP1Q9Y3R0 1128 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 RIIAD1A6NNX1 92 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 LYNX1G3V0Z9 82 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 H3BN98 237 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 CRLF1O75462 422 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 LYNX1P0DP58 116 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 ZNF823P16415 610 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 ZNF16P17020 682 aaPredicted RBP13.55□□□□□ -0.24
DDX54-204ENST00000546898 ZNF3P17036 446 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 GRK5P34947 590 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 GGT2P36268 569 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 GPR6P46095 362 aaPredicted RBP13.55□□□□□ -0.24
DDX54-204ENST00000546898 SLC25A1P53007 311 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 TMEM33P57088 247 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 ECH1Q13011 328 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 CRMP1Q14194 572 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 TMEM255AQ5JRV8 349 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 CORO6Q6QEF8 472 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 TMEM179BQ7Z7N9 219 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 HPS1Q92902 700 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 APOBEC3DQ96AK3 386 aaPredicted RBP13.55□□□□□ -0.24
DDX54-204ENST00000546898 NMNAT2Q9BZQ4 307 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 ZNF556Q9HAH1 456 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 SAP30LQ9HAJ7 183 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 CMC2Q9NRP2 79 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 DECR2Q9NUI1 292 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 MRPL22Q9NWU5 206 aaKnown RBP13.55□□□□□ -0.24
DDX54-204ENST00000546898 TMEM160Q9NX00 188 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 ZDHHC8Q9ULC8 765 aa13.55□□□□□ -0.24
DDX54-204ENST00000546898 TIMM8AO60220 97 aaPredicted RBP13.54□□□□□ -0.24
DDX54-204ENST00000546898 LILRA1O75019 489 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 DEAF1O75398 565 aaPredicted RBP13.54□□□□□ -0.24
DDX54-204ENST00000546898 RP2O75695 350 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 DBHP09172 617 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 ANXA8P13928 327 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 KITLGP21583 273 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 COL8A2P25067 703 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 PYCR1P32322 319 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 CRYBB2P43320 205 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 BLVRAP53004 296 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 CCL8P80075 99 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 PSG7Q13046 419 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 CFAP77Q6ZQR2 320 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 LINC00346Q8IVM7 164 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 OR5L1Q8NGL2 311 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 DNAJC9Q8WXX5 260 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 YIPF5Q969M3 257 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 ATF6BQ99941 703 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 ZNF275Q9NSD4 429 aaPredicted RBP13.54□□□□□ -0.24
DDX54-204ENST00000546898 STARD10Q9Y365 291 aa13.54□□□□□ -0.24
DDX54-204ENST00000546898 IGHV1-69-2A0A0G2JMI3 117 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 ZSCAN5BA6NJL1 495 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 TPD52L2O43399 206 aaKnown RBP13.53□□□□□ -0.24
DDX54-204ENST00000546898 IGHV1-46P01743 117 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 RAC2P15153 192 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 SPI1P17947 270 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 FMO3P31513 532 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 DBPQ10586 325 aaPredicted RBP13.53□□□□□ -0.24
DDX54-204ENST00000546898 KRTAP27-1Q3LI81 207 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 SLC27A4Q6P1M0 643 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 OR9Q1Q8NGQ5 310 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 GTF3AQ92664 365 aaKnown RBP13.53□□□□□ -0.24
DDX54-204ENST00000546898 PTP4A1Q93096 173 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 SLCO4A1Q96BD0 722 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 NRBF2Q96F24 287 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 ELMOD3Q96FG2 381 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 PITX2Q99697 317 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 EGLN1Q9GZT9 426 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 POFUT1Q9H488 388 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 PURGQ9UJV8 347 aaKnown RBP13.53□□□□□ -0.24
DDX54-204ENST00000546898 COMMD3-BMI1R4GMX3 469 aa13.53□□□□□ -0.24
DDX54-204ENST00000546898 LRP5LA4QPB2 252 aa13.52□□□□□ -0.25
DDX54-204ENST00000546898 SPRY3O43610 288 aa13.52□□□□□ -0.25
DDX54-204ENST00000546898 CD55P08174 381 aa13.52□□□□□ -0.25
DDX54-204ENST00000546898 OSMP13725 252 aa13.52□□□□□ -0.25
DDX54-204ENST00000546898 ENTPD1P49961 510 aa13.52□□□□□ -0.25
DDX54-204ENST00000546898 TRIP10Q15642 601 aa13.52□□□□□ -0.25
DDX54-204ENST00000546898 TSTQ16762 297 aaKnown RBP13.52□□□□□ -0.25
DDX54-204ENST00000546898 FAM166AQ6J272 317 aa13.52□□□□□ -0.25
DDX54-204ENST00000546898 SHQ1Q6PI26 577 aaKnown RBP13.52□□□□□ -0.25
DDX54-204ENST00000546898 FBXW12Q6X9E4 464 aa13.52□□□□□ -0.25
DDX54-204ENST00000546898 COLCA1Q6ZS62 124 aa13.52□□□□□ -0.25
DDX54-204ENST00000546898 USP51Q70EK9 711 aa13.52□□□□□ -0.25
DDX54-204ENST00000546898 HIPK1Q86Z02 1210 aa13.52□□□□□ -0.25
DDX54-204ENST00000546898 OR51L1Q8NGJ5 315 aa13.52□□□□□ -0.25
DDX54-204ENST00000546898 HAVCR1Q96D42 359 aa13.52□□□□□ -0.25
DDX54-204ENST00000546898 CMBLQ96DG6 245 aa13.52□□□□□ -0.25
DDX54-204ENST00000546898 MSI2Q96DH6 328 aaKnown RBP13.52□□□□□ -0.25
DDX54-204ENST00000546898 C1QTNF5Q9BXJ0 243 aa13.52□□□□□ -0.25
DDX54-204ENST00000546898 PNRC2Q9NPJ4 139 aaKnown RBP13.52□□□□□ -0.25
DDX54-204ENST00000546898 DDX28Q9NUL7 540 aaKnown RBP13.52□□□□□ -0.25
DDX54-204ENST00000546898 DYSFO75923 2080 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 LOC100289279A0A1B0GTE1 492 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 TVP23AA6NH52 213 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 PPIHO43447 177 aaKnown RBP13.51□□□□□ -0.25
DDX54-204ENST00000546898 TIPRLO75663 272 aa13.51□□□□□ -0.25
DDX54-204ENST00000546898 GYPBP06028 91 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms