RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 SLC25A21Q9BQT8 299 aaPredicted RBP14.12□□□□□ -0.15
LDLR-204ENST00000545707 C12orf4Q9NQ89 552 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 MED9Q9NWA0 146 aa14.12□□□□□ -0.15
LDLR-204ENST00000545707 GDF2Q9UK05 429 aaPredicted RBP14.12□□□□□ -0.15
LDLR-204ENST00000545707 H3BML4 177 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 ADAM10O14672 748 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 HPP00738 406 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 CD34P28906 385 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 OVCH2Q7RTZ1 564 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.11□□□□□ -0.15
LDLR-204ENST00000545707 ZNF584Q8IVC4 421 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 PAQR4Q8N4S7 273 aaPredicted RBP14.11□□□□□ -0.15
LDLR-204ENST00000545707 ZNF248Q8NDW4 579 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 ST8SIA2Q92186 375 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 MRGPRFQ96AM1 343 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 PRELID1Q9Y255 219 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 TTLL8A6PVC2 850 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 D6RAR5 112 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 NPIPA5E9PKD4 350 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 SULT1C2O00338 296 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 APOC3P02656 99 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 FSTP19883 344 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 AVPR2P30518 371 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 LUMP51884 338 aaPredicted RBP14.11□□□□□ -0.15
LDLR-204ENST00000545707 HSD11B2P80365 405 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 SSBP1Q04837 148 aaKnown RBP14.11□□□□□ -0.15
LDLR-204ENST00000545707 BAMBIQ13145 260 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 DMRTC1Q5HYR2 192 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 CFAP77Q6ZQR2 320 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 TRAPPC6BQ86SZ2 158 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 ZBTB8AQ96BR9 441 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 CST11Q9H112 138 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 SUSD2Q9UGT4 822 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 NPIPA1Q9UND3 350 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 HRH3Q9Y5N1 445 aa14.11□□□□□ -0.15
LDLR-204ENST00000545707 ABCA7Q8IZY2 2146 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 A0A1W2PR77 199 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 KRBOX1C9JBD0 128 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 RAB27BO00194 218 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 TO15178 435 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 AQP8O94778 261 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 H2BFMP0C1H6 154 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 GNB3P16520 340 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 CAPZA1P52907 286 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 ATP1B3P54709 279 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 UNC119Q13432 240 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 PPP1R1AQ13522 171 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 ELP2Q6IA86 826 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 TSTD1Q8NFU3 115 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 OR5M8Q8NGP6 311 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 OR10K1Q8NGX5 313 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 LHFPL5Q8TAF8 219 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 CASTOR1Q8WTX7 329 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 ASB10Q8WXI3 467 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 MRPS24Q96EL2 167 aaKnown RBP14.1□□□□□ -0.15
LDLR-204ENST00000545707 ADAT3Q96EY9 351 aaPredicted RBP14.1□□□□□ -0.15
LDLR-204ENST00000545707 RHBDD3Q9Y3P4 386 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.1□□□□□ -0.15
LDLR-204ENST00000545707 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.1□□□□□ -0.15
LDLR-204ENST00000545707 OR14I1A6ND48 311 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 MELTFP08582 738 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 PXT1Q8NFP0 134 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 UCK1Q9HA47 277 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 SCPEP1Q9HB40 452 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 SLC5A6Q9Y289 635 aa14.1□□□□□ -0.15
LDLR-204ENST00000545707 MED12Q93074 2177 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 CABIN1Q9Y6J0 2220 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 OR2T1O43869 369 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 SNAPC5O75971 98 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 CD74P04233 296 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 TOMM20Q15388 145 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 ZNF260Q3ZCT1 412 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 C14orf28Q4W4Y0 310 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 RNASE10Q5GAN6 216 aaKnown RBP14.09□□□□□ -0.15
LDLR-204ENST00000545707 C1orf100Q5SVJ3 147 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 CLVS2Q5SYC1 327 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 LYPD6Q86Y78 171 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 ZNF441Q8N8Z8 693 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 SMRP1Q8NCR6 262 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 ADAD2Q8NCV1 583 aaKnown RBP14.09□□□□□ -0.15
LDLR-204ENST00000545707 PPP1R1CQ8WVI7 109 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 VRK1Q99986 396 aaPredicted RBP14.09□□□□□ -0.15
LDLR-204ENST00000545707 SOX7Q9BT81 388 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 EDEM2Q9BV94 578 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 SPAG17Q6Q759 2223 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 A0A1B0GTI1 187 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 MEGF11A6BM72 1044 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 IGHMP01871 453 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 DCNP07585 359 aaKnown RBP14.09□□□□□ -0.15
LDLR-204ENST00000545707 CD37P11049 281 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 ANOS1P23352 680 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 CD96P40200 585 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 CSNK1EP49674 416 aaKnown RBP14.09□□□□□ -0.15
LDLR-204ENST00000545707 TLE3Q04726 772 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 JMJD6Q6NYC1 403 aaPredicted RBP14.09□□□□□ -0.15
LDLR-204ENST00000545707 ZNF813Q6ZN06 617 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 KCTD9Q7L273 389 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 C17orf82Q86X59 251 aaPredicted RBP14.09□□□□□ -0.15
LDLR-204ENST00000545707 OR13C9Q8NGT0 318 aa14.09□□□□□ -0.15
LDLR-204ENST00000545707 OR2I1PQ8NGU4 316 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms