RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	LAP3	P28838	519 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	ALDH3B1	P43353	468 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	GDI2	P50395	445 aa	Known RBP	6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	CHN2	P52757	468 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	SLURP1	P55000	103 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	UCP2	P55851	309 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	SMIM11A	P58511	58 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	SELENOV	P59797	346 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	LCN6	P62502	163 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	ERVK-25	P63136	954 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	MRPS11	P82912	194 aa	Known RBP	6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	SPIB	Q01892	262 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	SCRN3	Q0VDG4	424 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	RIN1	Q13671	783 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	ENDOG	Q14249	297 aa	Known RBP	6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	SEC23B	Q15437	767 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	CARTPT	Q16568	116 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	SGCA	Q16586	387 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	PCGF3	Q3KNV8	242 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	CHRFAM7A	Q494W8	412 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	GAGE13	Q4V321	117 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	MTX3	Q5HYI7	312 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	CYB5R2	Q6BCY4	276 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZNF101	Q8IZC7	436 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	DEFB107A	Q8IZN7	70 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	ARHGAP24	Q8N264	748 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZCCHC24	Q8N2G6	241 aa	Known RBP	6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	CPEB3	Q8NE35	698 aa	Known RBP	6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	FANK1	Q8TC84	345 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	MCUR1	Q96AQ8	359 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	POM121L2	Q96KW2	1035 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440		Q96M85	177 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	FOXN4	Q96NZ1	517 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	CDRT15	Q96T59	188 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	SOX7	Q9BT81	388 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	TPK1	Q9H3S4	243 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	CHODL	Q9H9P2	273 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	MSL2	Q9HCI7	577 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	IL1RAP	Q9NPH3	570 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	NRIP3	Q9NQ35	241 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	POLE4	Q9NR33	117 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	SLCO1C1	Q9NYB5	712 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	LPAR3	Q9UBY5	353 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	ADAM21	Q9UKJ8	722 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	NDRG4	Q9ULP0	352 aa	Known RBP	6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	AURKC	Q9UQB9	309 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	TIMM10B	Q9Y5J6	103 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440		V9GYQ6	96 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	CUBN	O60494	3623 aa		6.56	□□□□□ -1.36
SNHG1-223	ENST00000545440	ATR	Q13535	2644 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	ANK3	Q12955	4377 aa	Known RBP	6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	LOC100509620	A0A075B734	347 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	C5orf49	A4QMS7	147 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	UNC119B	A6NIH7	251 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	C17orf100	A8MU93	164 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	DYNC1I1	O14576	645 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	PTP4A3	O75365	173 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	GADD45G	O95257	159 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	TXNDC12	O95881	172 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	FAM107A	O95990	144 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	IGHV3-13	P01766	116 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	MT-ND5	P03915	603 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	FABP3	P05413	133 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	VSIG10L2	P0DP72	767 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	COX5B	P10606	129 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	CTLA4	P16410	223 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	FPR3	P25089	353 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	WNT5A	P41221	380 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	RPS6KA3	P51812	740 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	FXYD6P3	P58550	94 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	ERVS71-1	P61550	626 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	MXRA7	P84157	204 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	PSG4	Q00888	419 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	AQP6	Q13520	282 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	MAD2L1BP	Q15013	274 aa	Predicted RBP	6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	MOG	Q16653	247 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	ELFN2	Q5R3F8	820 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	FAM166A	Q6J272	317 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	SMARCD3	Q6STE5	483 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	DPY19L2P2	Q6ZN68	376 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	RFPL4B	Q6ZWI9	263 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	LRP11	Q86VZ4	500 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	OR1J1	Q8NGS3	322 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	OR52J3	Q8NH60	311 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	AKR7L	Q8NHP1	331 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	SYNPR	Q8TBG9	265 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	C11orf40	Q8WZ69	217 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	RDH5	Q92781	318 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	RASD2	Q96D21	266 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	SNX18	Q96RF0	628 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	CCT8L2	Q96SF2	557 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZNF416	Q9BWM5	594 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	WNT5B	Q9H1J7	359 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	SYT4	Q9H2B2	425 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	OR51B6	Q9H340	312 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	MUC13	Q9H3R2	512 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	TMEM140	Q9NV12	185 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	NKIRAS2	Q9NYR9	191 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	VSX1	Q9NZR4	365 aa	Predicted RBP	6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	ACTR3B	Q9P1U1	418 aa		6.55	□□□□□ -1.36

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