RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ZNF23P17027 643 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 COL8A2P25067 703 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 FMO3P31513 532 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 GRK5P34947 590 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 GGT2P36268 569 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 CHN2P52757 468 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 TMEM33P57088 247 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 RIN1Q13671 783 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 FAM209AQ5JX71 171 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 SLC27A4Q6P1M0 643 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 OR51L1Q8NGJ5 315 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 PTP4A1Q93096 173 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 APOBEC3DQ96AK3 386 aaPredicted RBP13.42□□□□□ -0.26
CCDC78-216ENST00000544996 SLCO4A1Q96BD0 722 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 NRBF2Q96F24 287 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 DIRC2Q96SL1 478 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 ATF6BQ99941 703 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 TEX12Q9BXU0 123 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 CMC2Q9NRP2 79 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 MRPL22Q9NWU5 206 aaKnown RBP13.42□□□□□ -0.26
CCDC78-216ENST00000544996 STARD10Q9Y365 291 aa13.42□□□□□ -0.26
CCDC78-216ENST00000544996 C2CD3Q4AC94 2353 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 A8MV72 311 aaPredicted RBP13.41□□□□□ -0.26
CCDC78-216ENST00000544996 F5H5K5 113 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 SPRY3O43610 288 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 TIPRLO75663 272 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 CIB2O75838 187 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 NCR1O76036 304 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 OSMP13725 252 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 SPI1P17947 270 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 PAICSP22234 425 aaKnown RBP13.41□□□□□ -0.26
CCDC78-216ENST00000544996 PRKACGP22612 351 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 MMP15P51511 669 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 PSG7Q13046 419 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 GINS1Q14691 196 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 TSTQ16762 297 aaKnown RBP13.41□□□□□ -0.26
CCDC78-216ENST00000544996 SHQ1Q6PI26 577 aaKnown RBP13.41□□□□□ -0.26
CCDC78-216ENST00000544996 CFAP77Q6ZQR2 320 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 HS3ST5Q8IZT8 346 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 IQCF1Q8N6M8 205 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 OR6K6Q8NGW6 343 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 DNAJC9Q8WXX5 260 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 NMNAT2Q9BZQ4 307 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 EGLN1Q9GZT9 426 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 SAP30LQ9HAJ7 183 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 KIF17Q9P2E2 1029 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 ZDHHC8Q9ULC8 765 aa13.41□□□□□ -0.26
CCDC78-216ENST00000544996 NF1P21359 2839 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 TVP23AA6NH52 213 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 CDC14BO60729 498 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 IGHV1-46P01743 117 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 HMGN1P05114 100 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 GYPBP06028 91 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 TACSTD2P09758 323 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 IGHV4-31P0DP07 118 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 RAC2P15153 192 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 GPR6P46095 362 aaPredicted RBP13.4□□□□□ -0.26
CCDC78-216ENST00000544996 C6orf52Q5T4I8 152 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 CCDC121Q6ZUS5 278 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 GTF3AQ92664 365 aaKnown RBP13.4□□□□□ -0.26
CCDC78-216ENST00000544996 HPS1Q92902 700 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 OTULINQ96BN8 352 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 HAVCR1Q96D42 359 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 CMBLQ96DG6 245 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 ELMOD3Q96FG2 381 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 NTN4Q9HB63 628 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 PURGQ9UJV8 347 aaKnown RBP13.4□□□□□ -0.26
CCDC78-216ENST00000544996 AP4S1Q9Y587 144 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 COMMD3-BMI1R4GMX3 469 aa13.4□□□□□ -0.26
CCDC78-216ENST00000544996 CSPG4Q6UVK1 2322 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 HIVEP2P31629 2446 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 IGHV1-69-2A0A0G2JMI3 117 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 LRP5LA4QPB2 252 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 ZSCAN5BA6NJL1 495 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 ZNF593O00488 134 aaPredicted RBP13.39□□□□□ -0.27
CCDC78-216ENST00000544996 PPIHO43447 177 aaKnown RBP13.39□□□□□ -0.27
CCDC78-216ENST00000544996 LILRA1O75019 489 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 ADH4P08319 380 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 SPARCP09486 303 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 KITLGP21583 273 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 TNFSF4P23510 183 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 FASP25445 335 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 CRYBB2P43320 205 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 ENTPD1P49961 510 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 TPTEP56180 551 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 ATP6AP1Q15904 470 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 HFEQ30201 348 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 TMEM255AQ5JRV8 349 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 USP51Q70EK9 711 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 ZNF511Q8NB15 262 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 ZNRF4Q8WWF5 429 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 YIPF5Q969M3 257 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 SPTSSAQ969W0 71 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 UTP4Q969X6 686 aaKnown RBP13.39□□□□□ -0.27
CCDC78-216ENST00000544996 PLEKHA8Q96JA3 519 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 MAP6Q96JE9 813 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 POFUT1Q9H488 388 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 WDR76Q9H967 626 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 MSL2Q9HCI7 577 aa13.39□□□□□ -0.27
CCDC78-216ENST00000544996 PAPOLBQ9NRJ5 636 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms