RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 TAF9Q16594 264 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 FOXL2NBQ6ZUU3 175 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 KLBQ86Z14 1044 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 FAM86B1Q8N7N1 296 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 OR2Z1Q8NG97 314 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 LINC01006Q8NI28 216 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 HSH2DQ96JZ2 352 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 OR2V2Q96R30 315 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 C20orf141Q9NUB4 165 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 ADA2Q9NZK5 511 aa10.7□□□□□ -0.7
USP28-212ENST00000544750 NPIPB13A6NJU9 1138 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 NPIPB4C9JG80 1138 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 MCIDASD6RGH6 385 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 FSTL3O95633 263 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 MT-ND1P03886 318 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 HIST1H2ABP04908 130 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 CRYBA1P05813 215 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 MELTFP08582 738 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 T-ENOLP0DO92 83 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 UMPSP11172 480 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 RPS2P15880 293 aaKnown RBP10.69□□□□□ -0.7
USP28-212ENST00000544750 TNFSF4P23510 183 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 LAP3P28838 519 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 AQP2P41181 271 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 RBM34P42696 430 aaKnown RBP10.69□□□□□ -0.7
USP28-212ENST00000544750 YAP1P46937 504 aaKnown RBP10.69□□□□□ -0.7
USP28-212ENST00000544750 ARHGDIAP52565 204 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 GNB2P62879 340 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 SGCAQ16586 387 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 IFI44LQ53G44 452 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 GLYATQ6IB77 296 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 HIST3H2AQ7L7L0 130 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 HDDC2Q7Z4H3 204 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 ALDH16A1Q8IZ83 802 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 OFCC1Q8IZS5 231 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 CCDC197Q8NCU1 140 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 TMEM239Q8WW34 195 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 LIPHQ8WWY8 451 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 LZICQ8WZA0 190 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 HIST1H2ACQ93077 130 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 UBE2FQ969M7 185 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 ZDHHC16Q969W1 377 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 FAM162AQ96A26 154 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 INIPQ9NRY2 104 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 TNFRSF19Q9NS68 423 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 DCAF13Q9NV06 445 aaKnown RBP10.69□□□□□ -0.7
USP28-212ENST00000544750 TBCCD1Q9NVR7 557 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 MIOXQ9UGB7 285 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 RNF114Q9Y508 228 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 TIMM10BQ9Y5J6 103 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 POMT1Q9Y6A1 747 aa10.69□□□□□ -0.7
USP28-212ENST00000544750 TNFRSF13BO14836 293 aaPredicted RBP10.68□□□□□ -0.7
USP28-212ENST00000544750 PIP5K1CO60331 668 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 IGF2P01344 180 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 SEMG1P04279 462 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 IFNW1P05000 195 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 COX5BP10606 129 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 FUT1P19526 365 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 TUBG1P23258 451 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 MSX2P35548 267 aaPredicted RBP10.68□□□□□ -0.7
USP28-212ENST00000544750 ERFP50548 548 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 DAP3P51398 398 aaKnown RBP10.68□□□□□ -0.7
USP28-212ENST00000544750 ENDOGQ14249 297 aaKnown RBP10.68□□□□□ -0.7
USP28-212ENST00000544750 TAF11Q15544 211 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 DEFB107AQ8IZN7 70 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 NPEPL1Q8NDH3 523 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 MOSPD2Q8NHP6 518 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 ZNF420Q8TAQ5 688 aaPredicted RBP10.68□□□□□ -0.7
USP28-212ENST00000544750 NSMAFQ92636 917 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 HAVCR1Q96D42 359 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 NEIL1Q96FI4 390 aaPredicted RBP10.68□□□□□ -0.7
USP28-212ENST00000544750 FAM71F1Q96KD3 344 aaPredicted RBP10.68□□□□□ -0.7
USP28-212ENST00000544750 CDRT15Q96T59 188 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 NUDT16L1Q9BRJ7 211 aaKnown RBP10.68□□□□□ -0.7
USP28-212ENST00000544750 TMEM246Q9BRR3 403 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 GORASP2Q9H8Y8 452 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 TUBG2Q9NRH3 451 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 STX18Q9P2W9 335 aaKnown RBP10.68□□□□□ -0.7
USP28-212ENST00000544750 RHCGQ9UBD6 479 aa10.68□□□□□ -0.7
USP28-212ENST00000544750 IFNL4K9M1U5 179 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 ARPC2O15144 300 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 SURF4O15260 269 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 OR7A10O76100 309 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 ZNF205O95201 554 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 ABHD16AO95870 558 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 SCG5P05408 212 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 GSTM3P21266 225 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 FGF12P61328 243 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 ST3GAL3Q11203 375 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 PDCD1Q15116 288 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 ZNF181Q2M3W8 571 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 BEAN1Q3B7T3 259 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 ZNF404Q494X3 552 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 SAMD4BQ5PRF9 694 aaKnown RBP10.67□□□□□ -0.7
USP28-212ENST00000544750 RUSC1-AS1Q66K80 236 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 SLC27A4Q6P1M0 643 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 C16orf89Q6UX73 402 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 ZNF841Q6ZN19 808 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 ZNF620Q6ZNG0 422 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 SYT9Q86SS6 491 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms