RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 EGR3Q06889 387 aa11.34□□□□□ -0.59
DDX11-227ENST00000544652 ECH1Q13011 328 aa11.34□□□□□ -0.59
DDX11-227ENST00000544652 BEX5Q5H9J7 111 aa11.34□□□□□ -0.59
DDX11-227ENST00000544652 RBM48Q5RL73 367 aaKnown RBP11.34□□□□□ -0.59
DDX11-227ENST00000544652 ZNF684Q5T5D7 378 aa11.34□□□□□ -0.59
DDX11-227ENST00000544652 DEGS2Q6QHC5 323 aa11.34□□□□□ -0.59
DDX11-227ENST00000544652 TMEM108Q6UXF1 575 aa11.34□□□□□ -0.59
DDX11-227ENST00000544652 SSX6Q7RTT6 188 aa11.34□□□□□ -0.59
DDX11-227ENST00000544652 RFLNBQ8N5W9 214 aa11.34□□□□□ -0.59
DDX11-227ENST00000544652 ACBD7Q8N6N7 88 aa11.34□□□□□ -0.59
DDX11-227ENST00000544652 SLC30A7Q8NEW0 376 aa11.34□□□□□ -0.59
DDX11-227ENST00000544652 BPIFB6Q8NFQ5 453 aa11.34□□□□□ -0.59
DDX11-227ENST00000544652 THEM6Q8WUY1 208 aa11.34□□□□□ -0.59
DDX11-227ENST00000544652 ASB17Q8WXJ9 295 aa11.34□□□□□ -0.59
DDX11-227ENST00000544652 OR8B4Q96RC9 309 aa11.34□□□□□ -0.59
DDX11-227ENST00000544652 DUSP21Q9H596 190 aa11.34□□□□□ -0.59
DDX11-227ENST00000544652 ESRP2Q9H6T0 727 aaKnown RBP11.34□□□□□ -0.59
DDX11-227ENST00000544652 INPP5EQ9NRR6 644 aa11.34□□□□□ -0.59
DDX11-227ENST00000544652 DIMT1Q9UNQ2 313 aaKnown RBP11.34□□□□□ -0.59
DDX11-227ENST00000544652 CHD3Q12873 2000 aaKnown RBP11.34□□□□□ -0.59
DDX11-227ENST00000544652 ZNF254O75437 659 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 ADRA2AP08913 450 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 DCTDP32321 178 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 APLNRP35414 380 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 OPRL1P41146 370 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 HTR5AP47898 357 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 NR1H2P55055 460 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 GRB2P62993 217 aaKnown RBP11.33□□□□□ -0.6
DDX11-227ENST00000544652 BSPH1Q075Z2 132 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 TBC1D28Q2M2D7 210 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 TMEM154Q6P9G4 183 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 KCTD18Q6PI47 426 aaPredicted RBP11.33□□□□□ -0.6
DDX11-227ENST00000544652 EGFL6Q8IUX8 553 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 ZNF679Q8IYX0 411 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 ZNF540Q8NDQ6 660 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 OR10H4Q8NGA5 316 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 OR1J2Q8NGS2 313 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 IPCEF1Q8WWN9 437 aaPredicted RBP11.33□□□□□ -0.6
DDX11-227ENST00000544652 PLPPR2Q96GM1 343 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 TMEM80Q96HE8 168 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 SIGLEC11Q96RL6 698 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 DCLRE1CQ96SD1 692 aaKnown RBP11.33□□□□□ -0.6
DDX11-227ENST00000544652 KCNJ15Q99712 375 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 TMEM204Q9BSN7 226 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 YTHDF1Q9BYJ9 559 aaKnown RBP11.33□□□□□ -0.6
DDX11-227ENST00000544652 PAK1IP1Q9NWT1 392 aaPredicted RBP11.33□□□□□ -0.6
DDX11-227ENST00000544652 ERVK13-1Q9NX77 482 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 SCN3BQ9NY72 215 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 PLEKHB1Q9UF11 243 aaPredicted RBP11.33□□□□□ -0.6
DDX11-227ENST00000544652 TPRKBQ9Y3C4 175 aa11.33□□□□□ -0.6
DDX11-227ENST00000544652 CADP27708 2225 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 IGHV2OR16-5A0A0B4J2B6 119 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 DAPL1A0PJW8 107 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 CRYAAP02489 173 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 CDK1P06493 297 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 LIMS3P0CW19 117 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 LIMS4P0CW20 117 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 CALCRP30988 508 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 GDI2P50395 445 aaKnown RBP11.32□□□□□ -0.6
DDX11-227ENST00000544652 MVKQ03426 396 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 ST3GAL4Q11206 333 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 GALEQ14376 348 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 CDONQ4KMG0 1287 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 RNLSQ5VYX0 342 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 ZNF322Q6U7Q0 402 aaPredicted RBP11.32□□□□□ -0.6
DDX11-227ENST00000544652 AHSA2Q719I0 299 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 ZNF786Q8N393 782 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 PAQR4Q8N4S7 273 aaPredicted RBP11.32□□□□□ -0.6
DDX11-227ENST00000544652 SLC7A6Q92536 515 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 RADILQ96JH8 1075 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 TBX5Q99593 518 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 COPS4Q9BT78 406 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 MROQ9BYG7 248 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 NIPAL2Q9H841 368 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 CENPMQ9NSP4 180 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 SLCO1C1Q9NYB5 712 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 LRCH1Q9Y2L9 728 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 LRP12Q9Y561 859 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 ADGRG4Q8IZF6 3080 aa11.32□□□□□ -0.6
DDX11-227ENST00000544652 C5orf49A4QMS7 147 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 TRIM64A6NGJ6 449 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 A6NNC1 897 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 ABCD4O14678 606 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 SRSF10O75494 262 aaKnown RBP11.31□□□□□ -0.6
DDX11-227ENST00000544652 SULT1C4O75897 302 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 ABHD16AO95870 558 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 CD3EP07766 207 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 DBHP09172 617 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 H2BFMP0C1H6 154 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 ACSM4P0C7M7 580 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 CCL2P13500 99 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 COX6B1P14854 86 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 PCSK6P29122 969 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 GABARAPL2P60520 117 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 HGFACQ04756 655 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 SPOCK1Q08629 439 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 LRRN1Q6UXK5 716 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 LIAT1Q6ZQX7 453 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 COLCA1Q6ZS62 124 aa11.31□□□□□ -0.6
DDX11-227ENST00000544652 KCTD20Q7Z5Y7 419 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms