RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 ZNF433Q8N7K0 673 aaPredicted RBP17.45■□□□□ 0.38
COPS7A-218ENST00000543939 SNIP1Q8TAD8 396 aaKnown RBP17.45■□□□□ 0.38
COPS7A-218ENST00000543939 SLCO5A1Q9H2Y9 848 aa17.45■□□□□ 0.38
COPS7A-218ENST00000543939 MOB1AQ9H8S9 216 aa17.45■□□□□ 0.38
COPS7A-218ENST00000543939 BRD7Q9NPI1 651 aa17.45■□□□□ 0.38
COPS7A-218ENST00000543939 PARPBPQ9NWS1 579 aa17.45■□□□□ 0.38
COPS7A-218ENST00000543939 NUFIP1Q9UHK0 495 aaKnown RBP17.45■□□□□ 0.38
COPS7A-218ENST00000543939 IFITM5A6NNB3 132 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 AIPO00170 330 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 TMEM127O75204 238 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 ACSM4P0C7M7 580 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 SDHBP21912 280 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 PRKXP51817 358 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 CEACAM16Q2WEN9 425 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 CCDC92Q53HC0 331 aaPredicted RBP17.44■□□□□ 0.38
COPS7A-218ENST00000543939 TSPO2Q5TGU0 170 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 ASPHD2Q6ICH7 369 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 DCDC5Q6ZRR9 648 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 LRRC28Q86X40 367 aaPredicted RBP17.44■□□□□ 0.38
COPS7A-218ENST00000543939 CENPSQ8N2Z9 138 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 FBXO17Q96EF6 278 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 CAMK2AQ9UQM7 478 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 A0A0B4J203 849 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 P2RY10O00398 339 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 CST2P09228 141 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 SNRPBP14678 240 aaKnown RBP17.44■□□□□ 0.38
COPS7A-218ENST00000543939 SAMD12Q8N8I0 201 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 OR5H6Q8NGV6 325 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 KCNJ15Q99712 375 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 FOXB1Q99853 325 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 PPP1R3EQ9H7J1 279 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 CALHM2Q9HA72 323 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 CYSLTR2Q9NS75 346 aa17.44■□□□□ 0.38
COPS7A-218ENST00000543939 PCDHGA9Q9Y5G4 932 aaKnown RBP17.44■□□□□ 0.38
COPS7A-218ENST00000543939 FREM1Q5H8C1 2179 aa17.43■□□□□ 0.38
COPS7A-218ENST00000543939 A0A1B0GVC2 190 aa17.43■□□□□ 0.38
COPS7A-218ENST00000543939 FAM25AB3EWG3 89 aa17.43■□□□□ 0.38
COPS7A-218ENST00000543939 FAM25CB3EWG5 89 aa17.43■□□□□ 0.38
COPS7A-218ENST00000543939 FAM25GB3EWG6 89 aa17.43■□□□□ 0.38
COPS7A-218ENST00000543939 CD2P06729 351 aa17.43■□□□□ 0.38
COPS7A-218ENST00000543939 EIF4EP06730 217 aaKnown RBP17.43■□□□□ 0.38
COPS7A-218ENST00000543939 YES1P07947 543 aa17.43■□□□□ 0.38
COPS7A-218ENST00000543939 AZGP1P25311 298 aaKnown RBP17.43■□□□□ 0.38
COPS7A-218ENST00000543939 PTBP1P26599 531 aaKnown RBP eCLIP17.43■□□□□ 0.38
COPS7A-218ENST00000543939 CX3CR1P49238 355 aa17.43■□□□□ 0.38
COPS7A-218ENST00000543939 ZNF121P58317 390 aaPredicted RBP17.43■□□□□ 0.38
COPS7A-218ENST00000543939 ZNF169Q14929 603 aaPredicted RBP17.43■□□□□ 0.38
COPS7A-218ENST00000543939 ELFN2Q5R3F8 820 aa17.43■□□□□ 0.38
COPS7A-218ENST00000543939 GDPD1Q8N9F7 314 aa17.43■□□□□ 0.38
COPS7A-218ENST00000543939 SLC7A10Q9NS82 523 aa17.43■□□□□ 0.38
COPS7A-218ENST00000543939 CLEC4AQ9UMR7 237 aa17.43■□□□□ 0.38
COPS7A-218ENST00000543939 SLC5A6Q9Y289 635 aa17.43■□□□□ 0.38
COPS7A-218ENST00000543939 OR6C65A6NJZ3 312 aa17.42■□□□□ 0.38
COPS7A-218ENST00000543939 MAS1P04201 325 aa17.42■□□□□ 0.38
COPS7A-218ENST00000543939 FSTP19883 344 aa17.42■□□□□ 0.38
COPS7A-218ENST00000543939 OXA1LQ15070 435 aa17.42■□□□□ 0.38
COPS7A-218ENST00000543939 STK11Q15831 433 aa17.42■□□□□ 0.38
COPS7A-218ENST00000543939 HES5Q5TA89 166 aa17.42■□□□□ 0.38
COPS7A-218ENST00000543939 OR13C3Q8NGS6 347 aa17.42■□□□□ 0.38
COPS7A-218ENST00000543939 PRDM14Q9GZV8 571 aa17.42■□□□□ 0.38
COPS7A-218ENST00000543939 C14orf119Q9NWQ9 140 aa17.42■□□□□ 0.38
COPS7A-218ENST00000543939 SPATA2Q9UM82 520 aa17.42■□□□□ 0.38
COPS7A-218ENST00000543939 FOXJ3Q9UPW0 622 aa17.42■□□□□ 0.38
COPS7A-218ENST00000543939 ZNF175Q9Y473 711 aa17.42■□□□□ 0.38
COPS7A-218ENST00000543939 ARHGAP21Q5T5U3 1957 aa17.42■□□□□ 0.38
COPS7A-218ENST00000543939 RPL36A-HNRNPH2H7BZ11 118 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 B4GALT1P15291 398 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 IGFBP3P17936 291 aaPredicted RBP17.41■□□□□ 0.38
COPS7A-218ENST00000543939 PSMD7P51665 324 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 RIN1Q13671 783 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 BAK1Q16611 211 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 MCEMP1Q8IX19 187 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 OR8H2Q8N162 312 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 SLC22A24Q8N4F4 322 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 ZNF283Q8N7M2 679 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 OR8B12Q8NGG6 310 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 EXTL2Q9UBQ6 330 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 MALT1Q9UDY8 824 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 A0A1B0GTI1 187 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 SLC22A20A6NK97 555 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 ANXA2P2A6NMY6 339 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 TTLL8A6PVC2 850 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 AQP7O14520 342 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 KRT33AO76009 404 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 WISP2O76076 250 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 TGM6O95932 706 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 IGHV3-9P01782 118 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 ANXA2P07355 339 aaKnown RBP17.41■□□□□ 0.38
COPS7A-218ENST00000543939 OTX1P32242 354 aaPredicted RBP17.41■□□□□ 0.38
COPS7A-218ENST00000543939 GALK2Q01415 458 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 RSPO1Q2MKA7 263 aaPredicted RBP17.41■□□□□ 0.38
COPS7A-218ENST00000543939 NRN1LQ496H8 165 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 PYDC2Q56P42 97 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 PRSS45Q7RTY3 260 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 MINDY2Q8NBR6 621 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 DNAAF1Q8NEP3 725 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 OR4M1Q8NGD0 313 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 ZNF671Q8TAW3 534 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 LGALS14Q8TCE9 139 aa17.41■□□□□ 0.38
COPS7A-218ENST00000543939 PLEK2Q9NYT0 353 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms