RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 CMAHPQ9Y471 501 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 OTOGQ6ZRI0 2925 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 AKAP6Q13023 2319 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 LOC100130705A0A1B0GUX0 176 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 SLC16A6O15403 523 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 HCCSP53701 268 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 ECH1Q13011 328 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 GGTLC2Q14390 218 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 SPATA46Q5T0L3 261 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 RGS7BPQ6MZT1 257 aaPredicted RBP12.97□□□□□ -0.33
CD9-210ENST00000543916 SPATC1Q76KD6 591 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 SHFQ7M4L6 423 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 SLC16A9Q7RTY1 509 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 OTOSQ8NHW6 89 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 ABHD4Q8TB40 342 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 NRG4Q8WWG1 115 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 ZNF582Q96NG8 517 aaPredicted RBP12.97□□□□□ -0.33
CD9-210ENST00000543916 DCLRE1CQ96SD1 692 aaKnown RBP12.97□□□□□ -0.33
CD9-210ENST00000543916 SYT3Q9BQG1 590 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 CACNG6Q9BXT2 260 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 POFUT1Q9H488 388 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 PLK3Q9H4B4 646 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 CXorf56Q9H5V9 222 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 ELOVL3Q9HB03 270 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 ZNF701Q9NV72 531 aaPredicted RBP12.97□□□□□ -0.33
CD9-210ENST00000543916 H2AFY2Q9P0M6 372 aaPredicted RBP12.97□□□□□ -0.33
CD9-210ENST00000543916 MYEF2Q9P2K5 600 aaKnown RBP12.97□□□□□ -0.33
CD9-210ENST00000543916 AASSQ9UDR5 926 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 ITGB1BP2Q9UKP3 347 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 KLHDC2Q9Y2U9 406 aa12.97□□□□□ -0.33
CD9-210ENST00000543916 SPG11Q96JI7 2443 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 SLC22A31A6NKX4 558 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 B9A039 149 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 ZNF878C9JN71 531 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 CLPTM1O96005 669 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 ACSM4P0C7M7 580 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 GABRB1P18505 474 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 PTH2RP49190 550 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 ART1P52961 327 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 PPP1CBP62140 327 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 SNRPGP62308 76 aaKnown RBP12.96□□□□□ -0.33
CD9-210ENST00000543916 TMEM255AQ5JRV8 349 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 ARL9Q6T311 187 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 NAA40Q86UY6 237 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 ENTHD1Q8IYW4 607 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 SLC25A40Q8TBP6 338 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 RNF133Q8WVZ7 376 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 TRUB1Q8WWH5 349 aaKnown RBP12.96□□□□□ -0.33
CD9-210ENST00000543916 PERPQ96FX8 193 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 MARS2Q96GW9 593 aaKnown RBP12.96□□□□□ -0.33
CD9-210ENST00000543916 CNN2Q99439 309 aaKnown RBP12.96□□□□□ -0.33
CD9-210ENST00000543916 OR2J1Q9GZK6 312 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 YIPF3Q9GZM5 350 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 ADGRL4Q9HBW9 690 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 CENPMQ9NSP4 180 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 TBCCD1Q9NVR7 557 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 STARD10Q9Y365 291 aa12.96□□□□□ -0.33
CD9-210ENST00000543916 AKAP9Q99996 3911 aa12.96□□□□□ -0.34
CD9-210ENST00000543916 VSTM5A8MXK1 200 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 F5H5K5 113 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 NDUFS7O75251 213 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 ENTPD6O75354 484 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 LYNP07948 512 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 ZNF250P15622 560 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 PAX1P15863 534 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 ANOS1P23352 680 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 HTR1FP30939 366 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 OTX1P32242 354 aaPredicted RBP12.95□□□□□ -0.34
CD9-210ENST00000543916 MPV17P39210 176 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 SNRPD2P62316 118 aaKnown RBP12.95□□□□□ -0.34
CD9-210ENST00000543916 RFLNBQ8N5W9 214 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 ZNF454Q8N9F8 522 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 ZNF555Q8NEP9 628 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 SYNPRQ8TBG9 265 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 THEM6Q8WUY1 208 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 DOK1Q99704 481 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 FOXC2Q99958 501 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 COPS4Q9BT78 406 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 GSX2Q9BZM3 304 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 CXXC4Q9H2H0 198 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 HAO2Q9NYQ3 351 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 WARS2Q9UGM6 360 aaKnown RBP12.95□□□□□ -0.34
CD9-210ENST00000543916 DUSP13Q9UII6 198 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 COPS3Q9UNS2 423 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 NAV2Q8IVL1 2488 aa12.95□□□□□ -0.34
CD9-210ENST00000543916 IGLV3-9A0A075B6K5 115 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 H7C417 338 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 M0R135 149 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 APOL3O95236 402 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 CLIC3O95833 236 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 ALOX5APP20292 161 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 OPRL1P41146 370 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 EVX1P49640 407 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 RGS6P49758 472 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 TPTEP56180 551 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 KLF3P57682 345 aaPredicted RBP12.94□□□□□ -0.34
CD9-210ENST00000543916 ADARB1P78563 741 aaKnown RBP12.94□□□□□ -0.34
CD9-210ENST00000543916 MAD2L1BPQ15013 274 aaPredicted RBP12.94□□□□□ -0.34
CD9-210ENST00000543916 OCLNQ16625 522 aa12.94□□□□□ -0.34
CD9-210ENST00000543916 SLC25A30Q5SVS4 291 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms