RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 ZNF28P17035 718 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 IGFBP4P22692 258 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 ZP4Q12836 540 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 TDGQ13569 410 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 SCGB2B2Q4G0G5 96 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 KIAA0895LQ68EN5 471 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 GRINAQ7Z429 371 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 JAGN1Q8N5M9 183 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 INO80EQ8NBZ0 244 aaPredicted RBP12.29□□□□□ -0.44
VPS33A-208ENST00000543633 ZNF721Q8TF20 911 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 MVB12AQ96EY5 273 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 KLHDC3Q9BQ90 382 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 PNO1Q9NRX1 252 aaKnown RBP12.29□□□□□ -0.44
VPS33A-208ENST00000543633 FBXO4Q9UKT5 387 aa12.29□□□□□ -0.44
VPS33A-208ENST00000543633 TMEM184BQ9Y519 407 aaPredicted RBP12.29□□□□□ -0.44
VPS33A-208ENST00000543633 B4DGG1 531 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 SOX1O00570 391 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-208ENST00000543633 SIGLEC6O43699 453 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 ATG12O94817 140 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 DUS4LO95620 317 aaKnown RBP12.28□□□□□ -0.44
VPS33A-208ENST00000543633 GABRG2P18507 467 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 PNLIPRP2P54317 469 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 CXADRP78310 365 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 EBPQ15125 230 aaKnown RBP12.28□□□□□ -0.44
VPS33A-208ENST00000543633 TAF13Q15543 124 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 INPP5JQ15735 1006 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-208ENST00000543633 FAM74A1Q5RGS3 127 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 TMEM92Q6UXU6 159 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 ZNF813Q6ZN06 617 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 TRAPPC6BQ86SZ2 158 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 FJX1Q86VR8 437 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 PARGQ86W56 976 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 ZNF321PQ8N8H1 164 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 TMEM185AQ8NFB2 350 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 SLC26A10Q8NG04 563 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 OR51A2Q8NGJ7 313 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-208ENST00000543633 TBL1XR1Q9BZK7 514 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 ZNF175Q9Y473 711 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 OR2W5A6NFC9 320 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 TLCD2A6NGC4 264 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 DBX1A6NMT0 343 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 RAB27BO00194 218 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 STK17BO94768 372 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 THEGLP0DJG4 465 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 ZNF823P16415 610 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 BDKRB2P30411 391 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 CX3CR1P49238 355 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 MMP16P51512 607 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 ATP1B3P54709 279 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 GPR85P60893 370 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 CYCSP99999 105 aaKnown RBP12.28□□□□□ -0.44
VPS33A-208ENST00000543633 DEFA5Q01523 94 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 PPP1R1AQ13522 171 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 MOGAT2Q3SYC2 334 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 HLA-DQA1Q5Y7H0 255 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 ELP2Q6IA86 826 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 C17orf107Q6ZR85 190 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 SVBPQ8N300 66 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 ST7LQ8TDW4 575 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 SLC25A36Q96CQ1 311 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 NMES1Q9C002 83 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 OR8D2Q9GZM6 311 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 CST11Q9H112 138 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 CD207Q9UJ71 328 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 ANAPC10Q9UM13 185 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 FARSAQ9Y285 508 aaKnown RBP12.28□□□□□ -0.44
VPS33A-208ENST00000543633 EMC9Q9Y3B6 208 aa12.28□□□□□ -0.44
VPS33A-208ENST00000543633 TEX13DA0A0J9YY54 714 aaPredicted RBP12.27□□□□□ -0.44
VPS33A-208ENST00000543633 TCRBV21S2A2A0A5A6 115 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 DCDC2BA2VCK2 349 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 OR6C76A6NM76 312 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 RAD1O60671 282 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 PLGP00747 810 aaPredicted RBP12.27□□□□□ -0.44
VPS33A-208ENST00000543633 DAP3P51398 398 aaKnown RBP12.27□□□□□ -0.44
VPS33A-208ENST00000543633 IL13RA1P78552 427 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 TFF2Q03403 129 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 SPOCK1Q08629 439 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 CDNFQ49AH0 187 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 ACTBL2Q562R1 376 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 C1QL3Q5VWW1 255 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 C3orf33Q6P1S2 294 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 CORO6Q6QEF8 472 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 MISPQ8IVT2 679 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 SLC22A24Q8N4F4 322 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 ZNF248Q8NDW4 579 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 SLC30A7Q8NEW0 376 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 OR4D6Q8NGJ1 314 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 PPP1R14AQ96A00 147 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 ZNF75AQ96N20 296 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 RTN4RQ9BZR6 473 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 PDE7BQ9NP56 450 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 TMEM100Q9NV29 134 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 MKL2Q9ULH7 1088 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 MMP17Q9ULZ9 603 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 PCDHB10Q9UN67 800 aa12.27□□□□□ -0.44
VPS33A-208ENST00000543633 SPTBP11277 2137 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 KIF26BQ2KJY2 2108 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 A0A0B4J2A0 478 aa12.27□□□□□ -0.45
VPS33A-208ENST00000543633 TMEM218A2RU14 115 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms