RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 MYDGFQ969H8 173 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 DNAJC1Q96KC8 554 aaKnown RBP3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 C9orf72Q96LT7 481 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 BIRC8Q96P09 236 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 SORT1Q99523 831 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 CDX2Q99626 313 aaPredicted RBP3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 KLHDC3Q9BQ90 382 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 ECSITQ9BQ95 431 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 SYT11Q9BT88 431 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 WACQ9BTA9 647 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 CALN1Q9BXU9 219 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 ACTR3CQ9C0K3 210 aaPredicted RBP3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 ZBP1Q9H171 429 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 GOLPH3Q9H4A6 298 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 TUBB1Q9H4B7 451 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 NTN4Q9HB63 628 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 FOLH1BQ9HBA9 442 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 LY9Q9HBG7 655 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 SDF2L1Q9HCN8 221 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 RETNQ9HD89 108 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 SENP1Q9P0U3 644 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 UVRAGQ9P2Y5 699 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 B4GALT7Q9UBV7 327 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 MMP17Q9ULZ9 603 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 USH1CQ9Y6N9 552 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 SSC5DA1L4H1 1573 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 DUOX1Q9NRD9 1551 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 MYH4Q9Y623 1939 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 TRIP12Q14669 1992 aaPredicted RBP3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 UBR2Q8IWV8 1755 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 ANKRD11Q6UB99 2663 aaPredicted RBP3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 CDH23Q9H251 3354 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 SMIM23A6NLE4 172 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 PDZK1P1A8MUH7 402 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 E9PAM4 449 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 CDC7O00311 574 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 ENTPD5O75356 428 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 EEDO75530 441 aaKnown RBP3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 FARS2O95363 451 aaKnown RBP3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 GJB5O95377 273 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 CLIC3O95833 236 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 IGHV2-5P01817 119 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 PIGRP01833 764 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 AMBPP02760 352 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 KLK3P07288 261 aaPredicted RBP3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 RPS17P08708 135 aaKnown RBP3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 NR2C1P13056 603 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 ATF6P18850 670 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC2A5P22732 501 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 GABRR2P28476 465 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 UGT1A3P35503 534 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC26A3P40879 764 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 RGRP47804 291 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 TFPI2P48307 235 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 EIF2B2P49770 351 aaKnown RBP3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 GNG2P59768 71 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 UBE2MP61081 183 aaKnown RBP3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 NAA20P61599 178 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 VBP1P61758 197 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 LY6DQ14210 128 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 NCF4Q15080 339 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 ANGPT1Q15389 498 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 SPA17Q15506 151 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 FAM182AQ5T1J6 154 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 OR5M10Q6IEU7 315 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 ANKRD26P1Q6NSI1 321 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 RWDD4Q6NW29 188 aaKnown RBP3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 SPESP1Q6UW49 350 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 ASCL4Q6XD76 172 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 USP43Q70EL4 1123 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF677Q86XU0 584 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 RBM45Q8IUH3 476 aaKnown RBP3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 FAM9CQ8IZT9 166 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 PDIK1LQ8N165 341 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 RIBC1Q8N443 379 aaPredicted RBP3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 METTL13Q8N6R0 699 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 TTLQ8NG68 377 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 OR56A4Q8NGH8 313 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 OR5B3Q8NH48 314 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 CDC26Q8NHZ8 85 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF564Q8TBZ8 553 aaPredicted RBP3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 VN1R17PQ8TDU5 208 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 CACNG8Q8WXS5 425 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 FAM131CQ96AQ9 280 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 ARL5BQ96KC2 179 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 CEP170P1Q96L14 293 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 ART5Q96L15 291 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 PGLYRP4Q96LB8 373 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 NOL4LQ96MY1 436 aaPredicted RBP3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 PGLYRP2Q96PD5 576 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 TMEM109Q9BVC6 243 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 SRXN1Q9BYN0 137 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 PRRG3Q9BZD7 231 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 ACTR6Q9GZN1 396 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 PIGUQ9H490 435 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 CWH43Q9H720 699 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 UCK1Q9HA47 277 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 BEX1Q9HBH7 125 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 DIABLOQ9NR28 239 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms