RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 TCEAL5Q5H9L2 206 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 SLC8B1Q6J4K2 584 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 Q6ZSR3 168 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 TMEM150AQ86TG1 271 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 SLC22A9Q8IVM8 553 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 NKAIN4Q8IVV8 208 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 CDKL3Q8IVW4 592 aaPredicted RBP1.16□□□□□ -2.22
KNTC1-213ENST00000542727 CMTM1Q8IZ96 169 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 MIR7-3HGQ8N6C7 128 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 GATSQ8NAP1 163 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 OR11H7Q8NGC8 314 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 OR9A2Q8NGT5 310 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 OR6N1Q8NGY5 312 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 AKR7LQ8NHP1 331 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 TCEAL3Q969E4 200 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 SLC25A46Q96AG3 418 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 CDX2Q99626 313 aaPredicted RBP1.16□□□□□ -2.22
KNTC1-213ENST00000542727 PLA2G12AQ9BZM1 189 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 NT5C3AQ9H0P0 336 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 MTFP1Q9UDX5 166 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 ASB3Q9Y575 518 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 S4R3C0 116 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 ZSWIM8A7E2V4 1837 aa1.15□□□□□ -2.22
KNTC1-213ENST00000542727 SMIM26A0A096LP01 95 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 HEATR9A2RTY3 570 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 GABRR3A8MPY1 467 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 OR2J3O76001 311 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 H6PDO95479 791 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 NDUFB10O96000 172 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 ME2P23368 584 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 LOXP28300 417 aaPredicted RBP1.15□□□□□ -2.23
KNTC1-213ENST00000542727 FOXN2P32314 431 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 CDK5Q00535 292 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 PRKCDQ05655 676 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 CYP24A1Q07973 514 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 RBMY1FQ15415 496 aaKnown RBP1.15□□□□□ -2.23
KNTC1-213ENST00000542727 UNQ9165/PRO28630Q6UXU0 137 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 SLC16A13Q7RTY0 426 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 LRP11Q86VZ4 500 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 FAM228AQ86W67 206 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 KRTAP13-1Q8IUC0 172 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 CBR4Q8N4T8 237 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 CSGALNACT2Q8N6G5 542 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 TMEM105Q8N8V8 129 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 LINC00304Q8N9R0 145 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 SNX31Q8N9S9 440 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 CHST4Q8NCG5 386 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 GPR26Q8NDV2 337 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 TTLQ8NG68 377 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 OR56B2PQ8NGI1 322 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 OR1P1Q8NH06 330 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 SLC2A14Q8TDB8 520 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 TMEM230Q96A57 120 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 SEH1LQ96EE3 360 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 GALNT14Q96FL9 552 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 RBBP8Q99708 897 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 GGTLC1Q9BX51 225 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 PKIBQ9C010 78 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 BEX1Q9HBH7 125 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 LGALS13Q9UHV8 139 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 PITPNC1Q9UKF7 332 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 VANGL2Q9ULK5 521 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 SIGLEC9Q9Y336 463 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 KCNE3Q9Y6H6 103 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 AKNAQ7Z591 1439 aa1.15□□□□□ -2.23
KNTC1-213ENST00000542727 TMEM131Q92545 1883 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 PALLDQ8WX93 1383 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 IGKV1-8A0A0C4DH67 115 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 CENPVL3A0A0U1RRI6 287 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 A0A1B0GW55 424 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 LYRM9A8MSI8 78 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 SYCE1LA8MT33 242 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 H0Y8G0 127 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 H7C1H1 209 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 SOCS1O15524 211 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 RNF13O43567 381 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 CHST1O43916 411 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 EIF4E2O60573 245 aaKnown RBP1.14□□□□□ -2.23
KNTC1-213ENST00000542727 SLC22A5O76082 557 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 SEMA3DO95025 777 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 IGLV3-25P01717 112 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 ARG1P05089 322 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 CTSLP07711 333 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 UQCRFS1P1P0C7P4 283 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 DUX4L2P0CJ85 424 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 DUX4L3P0CJ86 424 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 DUX4L5P0CJ88 424 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 DUX4L6P0CJ89 424 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 DUX4L7P0CJ90 424 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 TROVE2P10155 538 aaKnown RBP eCLIP1.14□□□□□ -2.23
KNTC1-213ENST00000542727 ERGP11308 486 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 U2AF2P26368 475 aaKnown RBP eCLIP1.14□□□□□ -2.23
KNTC1-213ENST00000542727 TALDO1P37837 337 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 RBM34P42696 430 aaKnown RBP1.14□□□□□ -2.23
KNTC1-213ENST00000542727 SLC1A1P43005 524 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 SULT1E1P49888 294 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 CDH6P55285 790 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 ATP5IP56385 69 aaPredicted RBP1.14□□□□□ -2.23
KNTC1-213ENST00000542727 RPL23P62829 140 aaKnown RBP1.14□□□□□ -2.23
KNTC1-213ENST00000542727 RBX1P62877 108 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms