RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 CPQQ9Y646 472 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 IGHV2-70DA0A0C4DH43 119 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 PRRG2O14669 202 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 RGS16O15492 202 aaPredicted RBP4.7□□□□□ -1.66
DDB1-219ENST00000541513 PPIHO43447 177 aaKnown RBP4.7□□□□□ -1.66
DDB1-219ENST00000541513 SGCEO43556 437 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 NUAK1O60285 661 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 MGRN1O60291 552 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 ADAP1O75689 374 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 CCNKO75909 580 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 KRT75O95678 551 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 IGLV3-27P01718 113 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 IFNA16P05015 189 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 H2AFZP0C0S5 128 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 GIMD1P0DJR0 217 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 IGHV4-30-4P0DP06 118 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 CD36P16671 472 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 PSMC3P17980 439 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 ATP5A1P25705 553 aaKnown RBP4.7□□□□□ -1.66
DDB1-219ENST00000541513 CRABP1P29762 137 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 CALCRP30988 508 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 TGFBR2P37173 567 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 OMPP47874 163 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 HOXA1P49639 335 aaPredicted RBP4.7□□□□□ -1.66
DDB1-219ENST00000541513 RGS6P49758 472 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 CRISP1P54107 249 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 TAS2R60P59551 318 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 DGCR2P98153 550 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 FLI1Q01543 452 aaPredicted RBP4.7□□□□□ -1.66
DDB1-219ENST00000541513 SRSF1Q07955 248 aaKnown RBP eCLIP4.7□□□□□ -1.66
DDB1-219ENST00000541513 EFEMP1Q12805 493 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 GNMTQ14749 295 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 MTF1Q14872 753 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 TMED2Q15363 201 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 ZNHIT3Q15649 155 aaPredicted RBP4.7□□□□□ -1.66
DDB1-219ENST00000541513 TRIM16LQ309B1 348 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 TMEM52BQ4KMG9 183 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 RFTN2Q52LD8 501 aaPredicted RBP4.7□□□□□ -1.66
DDB1-219ENST00000541513 EIPR1Q53HC9 387 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 SOHLH1Q5JUK2 328 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 SPANXN4Q5MJ08 99 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 DCST2Q5T1A1 773 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 FNDC7Q5VTL7 733 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 SYPL2Q5VXT5 272 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 ANKRD26P1Q6NSI1 321 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 FAHD1Q6P587 224 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 EMBQ6PCB8 327 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 GDPD4Q6W3E5 623 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 STAC2Q6ZMT1 411 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 C3P1Q6ZMU1 363 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 ZNF730Q6ZMV8 503 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 Q6ZVQ6 151 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 ASB18Q6ZVZ8 466 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 H2AFVQ71UI9 128 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 DPPA2Q7Z7J5 298 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 SETD3Q86TU7 594 aaPredicted RBP4.7□□□□□ -1.66
DDB1-219ENST00000541513 FUNDC1Q8IVP5 155 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 DND1Q8IYX4 353 aaKnown RBP4.7□□□□□ -1.66
DDB1-219ENST00000541513 SPAG16Q8N0X2 631 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 DEFB106AQ8N104 65 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 UBL4BQ8N7F7 174 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 SLC37A3Q8NCC5 494 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 OR10J5Q8NHC4 309 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 FBXO25Q8TCJ0 367 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 PHF10Q8WUB8 498 aaKnown RBP4.7□□□□□ -1.66
DDB1-219ENST00000541513 FAM172AQ8WUF8 416 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 BAALCQ8WXS3 180 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 BORCS5Q969J3 196 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 PACRGQ96M98 296 aaPredicted RBP4.7□□□□□ -1.66
DDB1-219ENST00000541513 MCCC1Q96RQ3 725 aaPredicted RBP4.7□□□□□ -1.66
DDB1-219ENST00000541513 TIMP4Q99727 224 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 PRRT1Q99946 306 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 SEC22CQ9BRL7 303 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 DCUN1D5Q9BTE7 237 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 TUBB1Q9H4B7 451 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 C1orf109Q9NX04 203 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 EIF3KQ9UBQ5 218 aaKnown RBP4.7□□□□□ -1.66
DDB1-219ENST00000541513 LSM7Q9UK45 103 aaKnown RBP4.7□□□□□ -1.66
DDB1-219ENST00000541513 ING1Q9UK53 422 aaPredicted RBP4.7□□□□□ -1.66
DDB1-219ENST00000541513 CCL26Q9Y258 94 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 OR2W1Q9Y3N9 320 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 CACNA1IQ9P0X4 2223 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 CACNA1HO95180 2353 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 MUC3AQ02505 3323 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 ZNF318Q5VUA4 2279 aa4.7□□□□□ -1.66
DDB1-219ENST00000541513 SHROOM3Q8TF72 1996 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 CKAP5Q14008 2032 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 A0A087X1B8 175 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 OR2AT4A6NND4 320 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 BTNL10A8MVZ5 291 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 H7C0C1 242 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.69□□□□□ -1.66
DDB1-219ENST00000541513 DCTN6O00399 190 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 PLPP3O14495 311 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 SLC31A2O15432 143 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 CXCL13O43927 109 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 OR7A10O76100 309 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 JCHAINP01591 159 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 OCM2P0CE71 109 aa4.69□□□□□ -1.66
DDB1-219ENST00000541513 MED14OSP0DP75 135 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms