RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 CD226Q15762 336 aa12.86□□□□□ -0.35
SFSWAP-210ENST00000541286 ZNF626Q68DY1 528 aa12.86□□□□□ -0.35
SFSWAP-210ENST00000541286 SYS1Q8N2H4 156 aa12.86□□□□□ -0.35
SFSWAP-210ENST00000541286 SLC2A12Q8TD20 617 aa12.86□□□□□ -0.35
SFSWAP-210ENST00000541286 ADOQ96SZ5 270 aa12.86□□□□□ -0.35
SFSWAP-210ENST00000541286 WDR77Q9BQA1 342 aaPredicted RBP12.86□□□□□ -0.35
SFSWAP-210ENST00000541286 ZNF337Q9Y3M9 751 aa12.86□□□□□ -0.35
SFSWAP-210ENST00000541286 SVILO95425 2214 aa12.86□□□□□ -0.35
SFSWAP-210ENST00000541286 RAB38P57729 211 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 C9orf152Q5JTZ5 239 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 H3F3CQ6NXT2 135 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 DPY19L2P2Q6ZN68 376 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 MED25Q71SY5 747 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 BCORP1Q8N888 145 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 AGBL5Q8NDL9 886 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 MRPL48Q96GC5 212 aaKnown RBP12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 PDCD10Q9BUL8 212 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 SLC19A3Q9BZV2 496 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 RAB33BQ9H082 229 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 AKAP7Q9P0M2 348 aaPredicted RBP12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 MIOXQ9UGB7 285 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 TM4SF5O14894 197 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 SRPX2O60687 465 aaPredicted RBP12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 JMJD7P0C870 316 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 TAS2R20P59543 309 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 LTBQ06643 244 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 PNPLA2Q96AD5 504 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 OR10A5Q9H207 317 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 ANKRD10Q9NXR5 420 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 TAS2R5Q9NYW4 299 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 PLEKHA6Q9Y2H5 1048 aa12.85□□□□□ -0.35
SFSWAP-210ENST00000541286 A0A087WUJ7 227 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 C9orf172C9J069 976 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 GABARAPH6UMI1 98 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 CLDN4O14493 209 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 ICOSLGO75144 302 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 GTF2F2P13984 249 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 PNLIPP16233 465 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 ADRA2CP18825 462 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 DLX5P56178 289 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 GMFBP60983 142 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 BIKQ13323 160 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 DYRK1AQ13627 763 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 C1QL3Q5VWW1 255 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 COX15Q7KZN9 410 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 OR2W3Q7Z3T1 314 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 OR2AK2Q8NG84 335 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 EXO5Q9H790 373 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 FRRS1LQ9P0K9 344 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 FOXJ3Q9UPW0 622 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 CLDN16Q9Y5I7 305 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 KLF2Q9Y5W3 355 aaPredicted RBP12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 RBBP9O75884 186 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 GLCEO94923 617 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 CELA2AP08217 269 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 RNH1P13489 461 aaKnown RBP12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 CNR1P21554 472 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 DPP4P27487 766 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 EFNB2P52799 333 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 RSPO4Q2I0M5 234 aaPredicted RBP12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 OR6V1Q8N148 313 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 KDM8Q8N371 416 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 PLPP7Q8NBV4 271 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 KTI12Q96EK9 354 aaPredicted RBP12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 DLL3Q9NYJ7 618 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 MRM2Q9UI43 246 aaKnown RBP12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 MRPS33Q9Y291 106 aaKnown RBP12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 KALRNO60229 2985 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 ZFYVE26Q68DK2 2539 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 HCRTR2O43614 444 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 OR6A2O95222 327 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 TACSTD2P09758 323 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 CT45A8P0DMV1 189 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 CT45A9P0DMV2 189 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 Q499Y3 187 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 CT45A2Q5DJT8 189 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 ATP1A1-AS1Q5TC04 95 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 HACD4Q5VWC8 232 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 ZNF627Q7L945 461 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 MR1Q95460 341 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 CTHRC1Q96CG8 243 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 VSTM2LQ96N03 204 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 CMKLR1Q99788 373 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 SLC22A13Q9Y226 551 aa12.84□□□□□ -0.35
SFSWAP-210ENST00000541286 TNFSF15O95150 251 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 S1PR1P21453 382 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 RBM34P42696 430 aaKnown RBP12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 PPT1P50897 306 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 PLEKHN1Q494U1 663 aaPredicted RBP12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 TMEM17Q86X19 198 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 TEX19Q8NA77 164 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 ZSCAN1Q8NBB4 408 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 NDRG3Q9UGV2 375 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 TUBAL3A6NHL2 446 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 F5H0A9 414 aaPredicted RBP12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 GPRIN2O60269 458 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 S100A9P06702 114 aaKnown RBP12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 ADH6P28332 368 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 ALKBH1Q13686 389 aaKnown RBP12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 FAM69AQ5T7M9 428 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms