RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 C2orf72A6NCS6 295 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 J3QR89 54 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 PRAMEF4O60810 478 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 FOLR3P41439 243 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 SNRPEP62304 92 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 DHODHQ02127 395 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 SIRT6Q8N6T7 355 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 SIGLECL1Q8N7X8 197 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 SLC25A43Q8WUT9 341 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 AKR1E2Q96JD6 320 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 LHX6Q9UPM6 363 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 WNT1P04628 370 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 ERV3-1Q14264 604 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 HABP2Q14520 560 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 C17orf99Q6UX52 265 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 OR2G2Q8NGZ5 317 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 ACTR3CQ9C0K3 210 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 SEMA6CQ9H3T2 930 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 KCND3Q9UK17 655 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 A4GNTQ9UNA3 340 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 FAM96BQ9Y3D0 163 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 V9GYS6 101 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 ANGPTL7O43827 346 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 TUSC2O75896 110 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 IGHA2P01877 340 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 TOMM34Q15785 309 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 IQCJQ1A5X6 159 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 NCR3LG1Q68D85 454 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 LANCL3Q6ZV70 420 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 AAED1Q7RTV5 226 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 GUK1Q16774 197 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 TMEM123Q8N131 208 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 C9orf62Q8N4C0 152 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 SMIM7Q9BQ49 75 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 ANKRD36CQ5JPF3 1778 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 TBX19O60806 448 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 ATF1P18846 271 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 APOBEC1P41238 236 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 ELLP55199 621 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 SSX7Q7RTT5 188 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 TMEFF1Q8IYR6 380 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 BVESQ8NE79 360 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 NUDCD2Q8WVJ2 157 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 TRAF4Q9BUZ4 470 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 WWTR1Q9GZV5 400 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 S1PR5Q9H228 398 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 MTFP1Q9UDX5 166 aa13.63□□□□□ -0.23
SMARCA4-207ENST00000541122 OR8U8P0C7N1 319 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 RD3LP0DJH9 198 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 SUMO1P63165 101 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 ZNF90Q03938 601 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 TRMT12Q53H54 448 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 SMIM15Q7Z3B0 74 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 RXFP4Q8TDU9 374 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 LHX4Q969G2 390 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 SCMH1Q96GD3 660 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 V9GYH0 126 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 TMEM202A6NGA9 273 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 CTDSPLO15194 276 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 DOK2O60496 412 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 MRPL33O75394 65 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 IRS1P35568 1242 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 ZNF92Q03936 586 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 DPTQ07507 201 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 ZFP62Q8NB50 900 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 SLAMF6Q96DU3 332 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 PLEKHB1Q9UF11 243 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 MED16Q9Y2X0 877 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 GSTZ1O43708 216 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 OTX2P32243 289 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 CDCA3Q99618 268 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 LRP5O75197 1615 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 G3V3Q6 166 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 LRP3O75074 770 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 TNFSF4P23510 183 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 MAT1AQ00266 395 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 PLGLAQ15195 96 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 GPR119Q8TDV5 335 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 PLAC1Q9HBJ0 212 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 ASH2LQ9UBL3 628 aa13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 N4BP2Q86UW6 1770 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-207ENST00000541122 FABP6P51161 128 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 ACOT6Q3I5F7 207 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 C8orf82Q6P1X6 216 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 OR8U1Q8NH10 309 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 RAB18Q9NP72 206 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 ZNF346Q9UL40 294 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 RBP2P50120 134 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 TPPP2P59282 170 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 HMGCLL1Q8TB92 370 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 SUCNR1Q9BXA5 334 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 LAT2Q9GZY6 243 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 COL22A1Q8NFW1 1626 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 HSD17B6O14756 317 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 ETHE1O95571 254 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 LIMS3P0CW19 117 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 LIMS4P0CW20 117 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 FABP9Q0Z7S8 132 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.61□□□□□ -0.236e-8■■■■■ 50.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms